Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01039 ATGAGGTGCCAGTCAAATGTTAACAGCGGTGAAATTCCTGTGTGTTATACCGATGGGAATATTTCATACAAGGATCCAAGTTGCCCTGCGTATGTGCAGCCTGCTGATGTGAGTGGTTGGATGTATGTCAATGAACACGGGAAAATGTGTGGTCCCTATATTCAGGAGCAGTTATATGAGGGTTTAACTACTGGTTTCTTGCCAGTTGAGCTTCCTGTGTATCCTGTGATTAATGGCACATTAATGAACCCTGTACCATTGAATTACTTAAAGCAGTTTCCCAACCATGTTTCCACAGGGTTTTCTTATCTTGGTCCGGGTATCTCAAGTACAACCATGCCTATGAATTGTACTACCTCTTCTCATAAAGATACCAGGGCATATGGACAAGAAGGATCCTTTGACCATACTGCTACTATAGGTTTTAACCCTGATTCTAAGTCAGTTTCACAGTCACATATTAACCACTACGGTTGTGGATCCAATCATGAATCATTGAACTCAGAGGcattgaataatatattttctcagTCTGCTGAAGAATGCTGTTGGCTCTATGAGGATGGAAAGGGAATGAAAAATGGACCATATTCCattttgcaattaatttcCTGGCATCGTTATGGATATCTTCAGGATTCATCAGTGATCTATCACATTGAAAACAAGTGTAGCCCCTTTACACTACTGTCTGCTATAAATGGATGGAGAACAGATATGTCTGTAACCATGTCTGCTGCCCAAAGCAATGAGGTTGGTGGTATTGTAAGCTTCCTTTACGAAGTATCTGAGAACATTTCTTCTCAACTTCACTTTGGAGTCATGAAAGCTGCCCGTAGAGTTGTACTAGATGAGATTATTGGCAATATCCTTGCAGAATTTATTACTGAGAAGAAATACTGGAGGCATAAGCTTGAATCAGTTAATCATGCTTCTGAGACTTGCCTGCTGGACAGCAAAACgTCTGATGTTGCTGTGGATATGAGAAAAGCTACTGCTTTTCCAAGTGAGACTTCATCTTCATGTATTTTGGATGACCAGGCTTCTCAAGATATTTCCAGAGTATCCCCAACTAGCACCAAATCTGTTGGGAGCATCGAAAACTTTTGGTGGTCATATGCTTCTGTTCGTAAAGTACTCTTTGATTCCTGTATGCAAGTGATGTGGAATGCAGTGTTTTATGACGTGCTAGCACAGTACTTCTTTACttggagaaagagaaaactttGGTCTATTCAACCTAAACCTCAACCTCCTATTAATGGATGTAGAGATTATGTTGGGAAGATTGAATCAGCAGAAGCTTTGCTTCCCAGGCCAGTGTGCTCTGAATCTGAAGTTGATTGCTCTCTTCATGGTGGACTGGTAGCGACACAAAGAAATCATCTTTCTCAGCTACCTTCCATGTCTTCCATTGCTCTCAAATGCAGAAACTCACTAGAATTTTCAGGAGTATCATGCACTGACCAAAACCATAAAGATTTGTCATGCATTGTTGAAGGTGTGGAGAATGAGCTTCATTTGTCTGCCAAGATGTCTTTAACCGGAtatgttcaaaattttgttcataatGAAGTGGACAAATTAATGAATTCCCTTGAAGAAGTTAGATTGAGTGAGGATGCGGTTAGTGACATCGGCTTTTCAGATTTACAAGCTGATGAAATATCTACAAAGGAGATTATACCTGACAAGTTTGTGAATTCTATCAAAGTGGGAAATTTGTTACAGGAACCTTTATGCGGAAGTCAGATGTCTAATTTATTCTCAAGAGCATTTAAGAAGTTATGCATGCATGACAATGATGCCATCGATGAAGAGAAGATGGGTGACCTACCACCTGGATTTGAACAGAACAGTCAAAAAATTGTGCCACGGTACCGTTGTAAATATCAACCTTCAAGTTTTGTTAGACGTATTCCCAAGATTACAGAATATATTGCAACAGCACTGTGCCGGCAGACATTGCATAATGAAGTTGTTGAAGAGTggaaatcaatttttcttgatgCTGCACTGAGTCACTTTTATGTAGCATTTTGCACTGTAAATAACCGCCGCAAACTTGATGGTAATGAGGAAGGGAAAACATTCAATGTATGCAAACATCGTTTAAATGATCCTACTCCTGGAATTGGAAGAATGAAGGAGGGAGCAAATGATTCTTCATCCGGAGTTTCTATGGTGATtgataaatatacatattaccGGAAGAAGCTGTCACGGAAAGGGTTAGATTCTCAATGTGTTGCAGCAGATGGATCTGGGGTAAGCAATCAATCAGAGGGTAAGTTAAGGAAAGAAGTTTCTGGGGATGCAGACAAGACTGCAGAAGCCAAAACAGCTGCTGTTAAACCTGGAAAACCTAGGCCAATCAGAGGGCAGAGGGATGCATCCACCAATAGCAGGCCATTTCCTGTCATTATTACGAGTAACTTGGAAAGTGGTCAGGCATCCTTGAATACCACTAGTCAAAAAGTATTGAAGCTATCACACAGAGTTCAAAATGATGTTGACCTTGTTGTAAAACCTAAAGGGGAGAAGATCAAAGCCTCATCAGGAAATCAcgttggaatgaagaaagtaGTCGCTAACAATGGTCATGATGGTGTCATTCAGGGGAAGTCCAGTCGCCATTGCTCTAGAAAGTTACTAAATGTAACCAACAAAGtatccaaacaaaaaaggaagcaTCTAATGGATGGTCCACCATCCTCACATCCTGCAAAGGTTTTGAAAAGTGCTAATGATGGTGTAAAGATGGGTGCTGGGAGACAGGTTACCATGGCAAAAATGCATGCTGCTAAGTCTAAGTCATTTGATTTATATCCTAAATCTAATGGATGTGCTAGGACTTCTATTGATGGGTGGCAATGGCGTCAGTGGTCTCTAAATGCCAGTCCTGCTGATAGAGTTCGTGTCAGGGGCATCCCATCAGTTCAATCCAAGTGTGTAGATTCTGATAGCAATTTTTCTCAATGGTCAAATGGTAAGGGTCTTTCTGCCAGAACAAATAGGGTGAAATTGCGTAATCTTCTTGCTGCTGCAGAGGGTGCTGATCTTCTGAAAGCTACTCAATTGAAGGCTAGGAAAAAGCGGTTACGTTTTCAGCGGAGCAAGATACATGACTGGGGCCTTGTTGCCTTGGAGCCAATAGAAGCTGAGGACTTTGTTATCGAATATATTGGGGAATTAATTCGTCCTCAGATATCTGATATACGTGAACGTCAGTATGAAAAGATGGGAATTGGTAGCAGTTACCTTTTCAGGCTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTCATAAACCATTCTTGTGAGCCTAATTGCTACACAAAGGTTATATCTGTTGAgggtcaaaagaaaattttcatatatgcGAAACGACATATAGCTGCTGGTGAAGAAATCACATACAATTATAAGTTCCCtttggaggaaaaaaagatTCCCTGCAATTGTGGTTCTAGAAAGTGTCACGGATCATTGAATTA 3515 0.3886 MRCQSNVNSGEIPVCYTDGNISYKDPSCPAYVQPADVSGWMYVNEHGKMCGPYIQEQLYEGLTTGFLPVELPVYPVINGTLMNPVPLNYLKQFPNHVSTGFSYLGPGISSTTMPMNCTTSSHKDTRAYGQEGSFDHTATIGFNPDSKSVSQSHINHYGCGSNHESLNSEALNNIFSQSAEECCWLYEDGKGMKNGPYSILQLISWHRYGYLQDSSVIYHIENKCSPFTLLSAINGWRTDMSVTMSAAQSNEVGGIVSFLYEVSENISSQLHFGVMKAARRVVLDEIIGNILAEFITEKKYWRHKLESVNHASETCLLDSKTSDVAVDMRKATAFPSETSSSCILDDQASQDISRVSPTSTKSVGSIENFWWSYASVRKVLFDSCMQVMWNAVFYDVLAQYFFTWRKRKLWSIQPKPQPPINGCRDYVGKIESAEALLPRPVCSESEVDCSLHGGLVATQRNHLSQLPSMSSIALKCRNSLEFSGVSCTDQNHKDLSCIVEGVENELHLSAKMSLTGYVQNFVHNEVDKLMNSLEEVRLSEDAVSDIGFSDLQADEISTKEIIPDKFVNSIKVGNLLQEPLCGSQMSNLFSRAFKKLCMHDNDAIDEEKMGDLPPGFEQNSQKIVPRYRCKYQPSSFVRRIPKITEYIATALCRQTLHNEVVEEWKSIFLDAALSHFYVAFCTVNNRRKLDGNEEGKTFNVCKHRLNDPTPGIGRMKEGANDSSSGVSMVIDKYTYYRKKLSRKGLDSQCVAADGSGVSNQSEGKLRKEVSGDADKTAEAKTAAVKPGKPRPIRGQRDASTNSRPFPVIITSNLESGQASLNTTSQKVLKLSHRVQNDVDLVVKPKGEKIKASSGNHVGMKKVVANNGHDGVIQGKSSRHCSRKLLNVTNKVSKQKRKHLMDGPPSSHPAKVLKSANDGVKMGAGRQVTMAKMHAAKSKSFDLYPKSNGCARTSIDGWQWRQWSLNASPADRVRVRGIPSVQSKCVDSDSNFSQWSNGKGLSARTNRVKLRNLLAAAEGADLLKATQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPQISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKIPCNCGSRKCHGSLN 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01039 1171 MobiDBLite consensus disorder prediction 753 804 - -
Bva10g01039 1171 CDD SET_SETD1 1020 1166 - -
Bva10g01039 1171 Gene3D SET domain 999 1171 IPR046341 -
Bva10g01039 1171 SUPERFAMILY SET domain 1028 1168 IPR046341 -
Bva10g01039 1171 ProSiteProfiles Post-SET domain profile. 1155 1171 IPR003616 -
Bva10g01039 1171 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1171 IPR044570 GO:0042800|GO:0051568
Bva10g01039 1171 MobiDBLite consensus disorder prediction 891 910 - -
Bva10g01039 1171 ProSiteProfiles SET domain profile. 1032 1149 IPR001214 GO:0005515
Bva10g01039 1171 SMART set_7 1032 1155 IPR001214 GO:0005515
Bva10g01039 1171 SUPERFAMILY GYF domain 176 234 IPR035445 -
Bva10g01039 1171 Pfam SET domain 1044 1148 IPR001214 GO:0005515
Bva10g01039 1171 MobiDBLite consensus disorder prediction 765 781 - -
Bva10g01039 1171 Gene3D - 168 253 IPR035445 -
Bva10g01039 1171 SMART PostSET_3 1155 1171 IPR003616 -
Bva10g01039 1171 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1171 - -
Bva10g01039 1171 ProSiteProfiles GYF domain profile. 181 231 IPR003169 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01039 Bva-Chr10 7556812 7568733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01039 1031 1171 C2H2 Transcription Factor Family AT2G23740 37.423 8.47e-19 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva10g01039 SET 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01039 - - gmx:100805708 1313.52