Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01016 ATGGCTGCGGGTATGGATTTTTCTCCTCCATTTACGGTATTAGAAGGCAGTTACAACAAAGATAACTTATGCGTCACTGAAGATGAGAGCTCAAGGGATTCCAGCAAACTGAAACAAATGACAAATGGTAAACCCCCACGGCACCTCTCGGTCATGAGACATAGCATTAGCTCCACAAGGTTGCTGGCTGCAGCGGATTTGTGTTTGGACGCGAGGATTGTTGGAAATAAGTCATCATCTGACGAGAAGGCTGAGTTTCTACCCATCTTTCGCTCAGGAAGTTGCGCTGAAAGAGGACCTAAACAGTATATGGAAGATGAGCACTTATGTATAGATAATCTTATTGAACATCTAGGGTCAACTTCTGATATTCCTTCTCCTGGAGCATTTTATGGGGTGTTTGATGGTCATGGAGGAACAGACGCGGCTGCATTTATAAGAAACAACATCTTAAGATTCATAGTTGAGGACTCCCATTTCCCAACTTGTGTGGAGAAGGCAATTAAAAATGCCTTTCTGAAAGCTGATTATGCATTTGCTGATTCTAGTTCGCTTGATATCTCTTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGAGTCTGATAGTTGCCAATGCTGGGGATTGTCGAGCTGTATTGGGGAGGCGAGGTAGAGCTTTTGAGATGTCGAAAGACCACAAACCCAATTGCATGTCAGAAAGGCTAAGAATTGAGAAACTTGGTGGAGTAGTGTACGATGGATACCTGAATGGGCAACTATCTGTTGCCCGTGCCCTGGGAGACTGGCACATGAAGGGTCCCAAAGGTTCCGCCTGCCCTTTAAGCGCGGAACCGGAGTTGCAGGAAGCCTACCTCACTGAGGATGATGAGTTCTTGATTATGGGCTGTGATGGTCTGTGGGATGTTATGAGCAACCAATGTGCTGTGACCATGGCAAGGAAAGAATTGATGCTGCATAATGATCCAGAACGCTGTTCAAGAGAGCTCGTCAGAGAGGCCCTGAAGCGCAACACTTGTGATAATTTAACAgttgttgttgtttgtttCTCCCCAGATCCTCCTCCTCGGATAGAAATGCCTCAATCTCGAGTTAGAAGGAGTATATCAGCTGAGGGACTCAATCTACTTAAGGGTGTACTCGACTCTAACTCATG 1160 0.4509 MAAGMDFSPPFTVLEGSYNKDNLCVTEDESSRDSSKLKQMTNGKPPRHLSVMRHSISSTRLLAAADLCLDARIVGNKSSSDEKAEFLPIFRSGSCAERGPKQYMEDEHLCIDNLIEHLGSTSDIPSPGAFYGVFDGHGGTDAAAFIRNNILRFIVEDSHFPTCVEKAIKNAFLKADYAFADSSSLDISSGTTALTALVFGRSLIVANAGDCRAVLGRRGRAFEMSKDHKPNCMSERLRIEKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEAYLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVVVVCFSPDPPPRIEMPQSRVRRSISAEGLNLLKGVLDSNS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01016 386 SUPERFAMILY PP2C-like 85 352 IPR036457 -
Bva10g01016 386 SMART PP2C_4 81 349 IPR001932 -
Bva10g01016 386 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
Bva10g01016 386 MobiDBLite consensus disorder prediction 27 47 - -
Bva10g01016 386 CDD PP2Cc 90 351 IPR001932 -
Bva10g01016 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
Bva10g01016 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Bva10g01016 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
Bva10g01016 386 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 373 - -
Bva10g01016 386 Gene3D - 72 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01016 Bva-Chr10 7441430 7444699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01016 5 383 PP2C-type Phosphatase Gene Family AT2G33700 75.328 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01016 K14803 - qsu:112023621 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01016 10 7441430 7444699 Bva10g01016 10 7441430 7444699 ECH