Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01011 ATGGAGTGGCAAATTGAGGAGCAAGAACAGAGCCCAAATGCAAATGGAGGGCTATACGTTAAAGTGATGACCGACGAACAAATGGAGGTGCTGAGGCAACAGATCTCCGTGTACGCCACCATATGTGAGCAGCTCGTCGAGATGCACAAGGCCATCACTGCGCAACAGGACCTTGCAGTAGGAGTAGGACTGAGGCTGGGTAACTCCTACTGCGATCCACTGATGGTATCTTGTGGTTCTGGACACAAGATAACTGCGAGGCAGCGTTGGACTCCAACAGCCGTGCAGCTTGAGATACTGGAGCGTATTTTTGAGCAAGGCAATGGGACTCCCAGCAAACAAAAGATCAAAGAGATAACCACTGAGCTGGGGCAACACGGCCACATTTCTGAGACTAATGTCTACAATTGGTTCCAGAACAGAAGAGCTCGTTCAAAACGGAAACAAATAGCTTCCGAGCCCAATATCATTGTAGAGTCAGAACAAGAGTCTGAGTCTCCCAAAGAGAAAAGCCTGTCCTTGGAGAAAAGGGCCAGAGATGCATACTTGCACGGTCCTGACATAGGATTTGAGCAATTGGCGACGAGTAAGATGGAGTTTGGTGGCTGCTATTTTCAAGGAGAATTACAAGATATGGGTTTGGGTGGTCAAAGCCCCAATTCGCTGATTGCGTTGCTTGATTCCATATA 689 0.4819 MEWQIEEQEQSPNANGGLYVKVMTDEQMEVLRQQISVYATICEQLVEMHKAITAQQDLAVGVGLRLGNSYCDPLMVSCGSGHKITARQRWTPTAVQLEILERIFEQGNGTPSKQKIKEITTELGQHGHISETNVYNWFQNRRARSKRKQIASEPNIIVESEQESESPKEKSLSLEKRARDAYLHGPDIGFEQLATSKMEFGGCYFQGELQDMGLGGQSPNSLIALLDSI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01011 229 Gene3D - 88 153 - -
Bva10g01011 229 ProSiteProfiles 'Homeobox' domain profile. 83 148 IPR001356 GO:0003677
Bva10g01011 229 MobiDBLite consensus disorder prediction 149 173 - -
Bva10g01011 229 Pfam Homeodomain 87 147 IPR001356 GO:0003677
Bva10g01011 229 PANTHER WUSCHEL-RELATED HOMEOBOX 13 10 204 IPR044559 GO:0003700
Bva10g01011 229 CDD homeodomain 87 149 IPR001356 GO:0003677
Bva10g01011 229 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 10 204 - -
Bva10g01011 229 SUPERFAMILY Homeodomain-like 86 149 IPR009057 -
Bva10g01011 229 SMART HOX_1 85 152 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01011 Bva-Chr10 7419820 7420975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01011 18 149 Wox Gene Family AT4G35550 74.242 2.71e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva10g01011 Homeodomain 9.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01011 - - var:108342525 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01011 10 7419820 7420975 Bva10g01011 10 7419820 7420975 ECH