Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01009 ATGAGCTGCTTCTTTTGCATCAGTTCGAGCCGAAAGGATGTCAGCAAAGTTGAAATTGATAATGGCAGCGGGAAGGCGAAGGCCTATGCCAATAATGGTGGGGATGGAAGAACGGGGGATTCGTTAGAAGGAAATGGGAAGAGTGGTAACAGTCCTAAAAGCAGTGGGGCCCGTAGTTTCACATTTCGTGAACTTGCAGCTGCAACCAGGGGTTTTAAGGAAGTGAATTTGATTGGGGAGGGGGGTTTTGGAAGGGTTTACAAGGGTCGTCTGGAAACTGGCCAGGTTGTTGCtgttaaacaattaaatcacGATGGTCATCAAGGTTTTCAGGAATTTATAGTGGAGGTTCTCATGTTGAGCCTCCTACACCATTCTAATCTTGTTACCTTGATTGGCTACTGCACTGATGGAGATCAAAGGCTCCTGGTTTACGAATACATGCCCATGGGAAGCCTAGAAGATCATCTTTTTGATCTGAACCCAGAGAAAGAGCCACTAAGTTGGTCTACTCGGATGAAAATTGCTGTTGGTGCTGCTAGGGGCCTCGAGTATCTCCATTATTTTGGGCTTGCCAAACTTGGACCAGTTGGAGACAACACTCATGTTTCAACAAGGGTGATGGGAACATATGGCTACTGCGCCCCAGAGTATGCCATGAGTGGCAAATTAACGCTTAAGTCTGATATCTACAGCTTTGGTGTGGTCTTGTTGGAGTTGATCACTGGACGTAGGGCTATAGATGTCAGTAGGAGACCAGGGGAGCAAAACTTGGTTTCGTGGTCTCGCCAGTTTTTAAAGGACCGGAGAAAGTTTGTACAAATGGTTGATCCTCTTCTGCAAGGACGCTTCCCGTTGCGCTGTTTGCATCACGCAGTTGCCGTAACTGCCATGTGCCTCCAGGAGCAACCAAATTTTCGTCCACTGATTAGTGATATTGTTGTTGCACTGGAGTACCTGGCCTCTCAGCGCTGTGTCAAAGAAGTTCACCTTCCGTCTAAAATTGAGTACAGGCTTATACATACACGGGGATGGGGCACATCTCTGAGTTGCATGTGGAAAGAAGAGCTGGCCTGGCGTTTTTTACTTTTAGCGAGTGAGGTGTGTCTATCGACTCTTGGTTCTGACTACCGTATTAGAGAAGGGCGAGCGAGCATGGGATCTTGTATTCTTGCTGCttctttgta 1187 0.465 MSCFFCISSSRKDVSKVEIDNGSGKAKAYANNGGDGRTGDSLEGNGKSGNSPKSSGARSFTFRELAAATRGFKEVNLIGEGGFGRVYKGRLETGQVVAVKQLNHDGHQGFQEFIVEVLMLSLLHHSNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFDLNPEKEPLSWSTRMKIAVGAARGLEYLHYFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDVSRRPGEQNLVSWSRQFLKDRRKFVQMVDPLLQGRFPLRCLHHAVAVTAMCLQEQPNFRPLISDIVVALEYLASQRCVKEVHLPSKIEYRLIHTRGWGTSLSCMWKEELAWRFLLLASEVCLSTLGSDYRIREGRASMGSCILAASL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01009 395 MobiDBLite consensus disorder prediction 24 57 - -
Bva10g01009 395 PANTHER OS07G0668900 PROTEIN 3 187 - -
Bva10g01009 395 Gene3D Phosphorylase Kinase; domain 1 44 147 - -
Bva10g01009 395 Gene3D Transferase(Phosphotransferase) domain 1 148 188 - -
Bva10g01009 395 Pfam Protein tyrosine and serine/threonine kinase 76 187 IPR001245 GO:0004672|GO:0006468
Bva10g01009 395 Pfam Protein tyrosine and serine/threonine kinase 189 316 IPR001245 GO:0004672|GO:0006468
Bva10g01009 395 PANTHER OS07G0668900 PROTEIN 189 325 - -
Bva10g01009 395 PANTHER OS07G0668900 PROTEIN 189 325 - -
Bva10g01009 395 PANTHER OS07G0668900 PROTEIN 3 187 - -
Bva10g01009 395 SUPERFAMILY Protein kinase-like (PK-like) 52 315 IPR011009 -
Bva10g01009 395 Gene3D Transferase(Phosphotransferase) domain 1 189 321 - -
Bva10g01009 395 ProSiteProfiles Protein kinase domain profile. 72 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01009 395 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Bva10g01009 395 MobiDBLite consensus disorder prediction 43 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01009 Bva-Chr10 7409540 7413223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01009 1 322 Glycoside Hydrolase AT3G07070 53.631 5.44e-128 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva10g01009 PK_Tyr_Ser-Thr 3.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01009 - - qsu:112031930 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01009 10 7409540 7413223 Bva10g01009 10 7409540 7413223 ECH