Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01008 ATGGGAAACTGTCTTGATAAGATTAGCCTTCGCGGCACCAAACCATCGGTACCCAATTCTGCAGAAAGGTGGTCGTCATCGGGCAGAGACAAGGATAACGTTAACGGGAAGGAAGTGGCGGAACAAAAAGTGACGAGGGAACATGCATATGGGAGTACAGGAAAAATCGTGACGCCAAACCTTAAAGTGTTCACTCTGGATGAGTTGAAGAGTGCGACTAGAAATTTTAGACCAGACACGGTGCTGGGCGAGGGTGGTTTTGGCCGTGTCTTCAAGGGTTGGATTGACGACAAAACCTACAAGCCTTCCAGAGTTGGCGTTGGCATCCCCGTCGCGGTTAAGAAATCTAATCCCGATAGCCTCCAAGGAATGGAAGAATGGGAGAGTGAAGTCCAATTCTTGGGCAAGTTCTCTCATCCAAACCTGGTTAAACTGCTTGGCTACTGCTCGGAGGAAAATCAATTCCTCCTTGTATACGAATACATGCAGAAGGGCAGCTTGGAAAACCACCTCTTCAGAAgagGTCCGGAGCCACTTGCGTGGGACATAAGGCTCAAAATAGCCATAGGAGCTGCTCGAGGGCTTGCTTTCTTGCATAATTCAGAGAAGTCCGTCATCTATCGAGACTTCAAGTCCTCTAACATCTTGCTCGATGGGGCTTACAATGCAAAGCTTTCAGATTTTGGATTGGCAAAGCTTGGCCCCGCCAGCGACAAATCCCACGTAACGACGCGGGTGATGGGAACATACGGTTACGCGGCACCCGAGTACATAGCTACAGGTCATCTGTATGTGAAAAGCGACGTGTATGGATTTGGGGTTGTACTGCTGGAAGTGTTGACGGGCTTAGCAGCACTGGACCCCAATCGACCTTCGGGAGAACAGAATTTGGTGGATTACTGCAAGCCATCCTTGAGCACAAAAAGGAAGCTCAAAAAGATAATGGACCCAGGGCTGGGCGAACGTTATCCAATAGCAGCTGCATTTCAAGTAGCCCAGCTCATACCCAAGTGTTTGGAATCAGACCCAAAGCGTCGACCATCCATGGAAGAGGTCTTGGAAGTCTTAGACAaggcaaatcaaattaaatacaaacCTAACTCTAAGACTAAGTCCAACAAGAAGGCCAGCGTAGTGCATCAGACTCAGACTCAGTCTCAGACGGAGCGTTCCCATTCCACTTCCACCTATGCCTTACCATCTTA 1205 0.4805 MGNCLDKISLRGTKPSVPNSAERWSSSGRDKDNVNGKEVAEQKVTREHAYGSTGKIVTPNLKVFTLDELKSATRNFRPDTVLGEGGFGRVFKGWIDDKTYKPSRVGVGIPVAVKKSNPDSLQGMEEWESEVQFLGKFSHPNLVKLLGYCSEENQFLLVYEYMQKGSLENHLFRRGPEPLAWDIRLKIAIGAARGLAFLHNSEKSVIYRDFKSSNILLDGAYNAKLSDFGLAKLGPASDKSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEVLTGLAALDPNRPSGEQNLVDYCKPSLSTKRKLKKIMDPGLGERYPIAAAFQVAQLIPKCLESDPKRRPSMEEVLEVLDKANQIKYKPNSKTKSNKKASVVHQTQTQSQTERSHSTSTYALPS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01008 401 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Bva10g01008 401 MobiDBLite consensus disorder prediction 11 39 - -
Bva10g01008 401 MobiDBLite consensus disorder prediction 363 401 - -
Bva10g01008 401 Gene3D Transferase(Phosphotransferase) domain 1 162 387 - -
Bva10g01008 401 PANTHER OS01G0588500 PROTEIN-RELATED 31 381 - -
Bva10g01008 401 ProSitePatterns Protein kinases ATP-binding region signature. 82 115 IPR017441 GO:0005524
Bva10g01008 401 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Bva10g01008 401 ProSiteProfiles Protein kinase domain profile. 76 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01008 401 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 31 381 - -
Bva10g01008 401 CDD STKc_IRAK 82 358 - -
Bva10g01008 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bva10g01008 401 MobiDBLite consensus disorder prediction 25 39 - -
Bva10g01008 401 Gene3D Phosphorylase Kinase; domain 1 60 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01008 Bva-Chr10 7405764 7407540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01008 27 356 Glycoside Hydrolase AT3G07070 46.726 1.11e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva10g01008 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01008 - - aprc:113865973 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01008 10 7405764 7407540 Bva10g01008 10 7405764 7407540 ECH