Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01004 ATGATAGAAAAGAAGGAGGAGTTTCTCACTGTGGCGCCATTCCAGTGTGCATGGCGAGAGGATTTGAAATTCCGAGAAGCAGGTCGGGGTTGTGTGTCTTTTGAAGCTTTTGCTCGCAATGATGTCACGCTGGTTTTCCGGGAGAATGTGGGAAGCCGGCACTACCATTATAAAAGAGACAGTTGTCCTCACTATACTGTCATATTGGGTAGTCATAGGAATCGACGATTGAGAATTGAGGTTGACGGAAAAACTGTCGTCGATATAGCAGGCGTTGGACTTTGTTGCTCTTCATCATTCCAGAGTTATTGGATCAGTATCTATGATGGGTTGATCTGCATCGGCAAAGGGAAATACTCCTTTCAGGATATCGTCTTCCAATGGCTCGATTCTAATCCAAATTGTAATGTTCGGTATATTGGGCTCAGCAGCTGGGATAAACATGTTAGCTATAGAAATGTCAACGTTTTGTCATTACTACACAATAATATGTCCCTGTGGAAGCATGTTGATTTTGGTGAATATCAAGTTGAAGAGGAGGGCGGTGAGGACTTGGGAGATGAACTGATGGATTATGAGAACTGGGGGTTGAAAAATTTTCTCGAGAGTTGGGAATTATCTGACATGTTATTCATCGTTGGAGTGGAGGAAAGACCTGTACCtgctcacaaggcaattttaGCCTCATCTGGGAATTTTCCTTTAAGCTCAGCGTCGTACGTTATCTCGTTGCCTACAGTAACTTACCCAATTTTCCATGCATTGCTTCAGTACGTCTATACTGGCTGGACCCAGATCCCACAGGAACAACTTGGTTCCTTGAGGGCTGTAAGCCTACAGTTTGAAGTTATGCCATTAGTGAAGCAATGTGAAGAGACTATGGAACGGATTAAGCTAAACAGGAAGTTGTTTGAATCAGGCAACAATGTGGAGTTATCATATCCAAGCACCTGGCCTCGTTGTACAACTTTGCCTTCACTTCCCATTGGAATTCAGAGACTGAAACAATTGCAGTCAACTGGCGAGTACAGTGATGTAAACATGTACATTGAAGGTTATGGCCTTGTTGCCCAAGtgcataaaattattctcagTTCATGGAGTATCCCCTTTGCCAAGATGTTCACCAATGGAATGAGTGAAAGCATTTCATCAGAGGTTACTATAAGGGATGTGCCACCAGAAGCTTTCGGAGCAATGCTTAAGTTTATATACAGTGGTGAACTAAGTGACGCAGTTATTGTAGATTCTGGTGCTTTCTTGCTCCAATTGCTTTTGTTAGCTGACCAATTTGGAGTGACTGTTCTTCATCAAGAATGCTGCAAAATACTGTTAGGATGCCTCTCAGAGGACTCATTATGTCCACTCCTCCAAGTGGTTTCACCGATCCCATCATGTAGACTTATTAAAGAAACATGCCAGAGGAAAATTTCTATGAACTTTGACTATTGTACCAGTACAAGTACCGACTTCACCCTGTTAGAAGAGACAGTTTTTAGCAATATCATTCAGCATCCGGATCTGGCAGTAACATCTGAAGAGAAAGTTCTTGATGCAATCCTAGTCTTTGGCATGAAGGCAAAAGAGTTATTCGGGTGGGAGGTGTTGGATGAGTTGATGATAAAGTCAAGACCTGAACTCGTTTTTGGCGAGAGGCTTCAGTTAGTTAACGACTTGCTTCCCTTTGTGCGATTTCCGCTACTGCCATCTTCATTGCTTAAAAAGTTGCAGAATAGCAACATTAGCAGGCATATTCCTGTCTTGCGGAGTCTGGTTGAtgaagcaattaattttattgaatgtgGACCAGCAAGgacaaaaaatgaagagaaTGTTAGATTCCAACATAGGCGGTCTAGTTACAAGGAGTGTCAGTACATATGTGATGGGGATAGCAATGGAGTTCTGTACTTTGCCGGCACATCATATGGTGAACATCGGTGGGTTAATCCCGTATTGGCAAAGACACTTACTATTATGGCTAGCGGTCCCCATTCAAGATACACTGATCCTAAGGTTTTGGTCTCAAGAACTTACCAGGGAACCTCTTTTGCAGGGCCTCGAATGGAAAATGGACATGAGTGTGCCTGGTGGATGGTTGACCTTGGCCAAGATCATCAGCTTATGTGCAACTACTACACACTGAGGCAGGATGGATCCACAGCCTTCGTGAGATGTTGGAATTTTCAGGCTTCACTGGACGGGAAGACCTGGGCGAACTTAAGAGTACATGAAAATGATGGGAGAGTGTGCAAGCCCGGTCAGTTTGCATCTTGGCCCATAATGGGGGCAAATGCTCTGCTTCCTTTTAGGTTTTTTCGGGTTATTCTCACTGGACCAACTACAGATGCCACTAATCCTTGGAACTTCAGCATTTGCTACTTGGAACTATATGGCTACTTCCTTTA 2408 0.424 MIEKKEEFLTVAPFQCAWREDLKFREAGRGCVSFEAFARNDVTLVFRENVGSRHYHYKRDSCPHYTVILGSHRNRRLRIEVDGKTVVDIAGVGLCCSSSFQSYWISIYDGLICIGKGKYSFQDIVFQWLDSNPNCNVRYIGLSSWDKHVSYRNVNVLSLLHNNMSLWKHVDFGEYQVEEEGGEDLGDELMDYENWGLKNFLESWELSDMLFIVGVEERPVPAHKAILASSGNFPLSSASYVISLPTVTYPIFHALLQYVYTGWTQIPQEQLGSLRAVSLQFEVMPLVKQCEETMERIKLNRKLFESGNNVELSYPSTWPRCTTLPSLPIGIQRLKQLQSTGEYSDVNMYIEGYGLVAQVHKIILSSWSIPFAKMFTNGMSESISSEVTIRDVPPEAFGAMLKFIYSGELSDAVIVDSGAFLLQLLLLADQFGVTVLHQECCKILLGCLSEDSLCPLLQVVSPIPSCRLIKETCQRKISMNFDYCTSTSTDFTLLEETVFSNIIQHPDLAVTSEEKVLDAILVFGMKAKELFGWEVLDELMIKSRPELVFGERLQLVNDLLPFVRFPLLPSSLLKKLQNSNISRHIPVLRSLVDEAINFIECGPARTKNEENVRFQHRRSSYKECQYICDGDSNGVLYFAGTSYGEHRWVNPVLAKTLTIMASGPHSRYTDPKVLVSRTYQGTSFAGPRMENGHECAWWMVDLGQDHQLMCNYYTLRQDGSTAFVRCWNFQASLDGKTWANLRVHENDGRVCKPGQFASWPIMGANALLPFRFFRVILTGPTTDATNPWNFSICYLELYGYFL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01004 802 Gene3D Potassium Channel Kv1.1; Chain A 195 310 IPR011333 -
Bva10g01004 802 Pfam BTB And C-terminal Kelch 463 523 IPR011705 -
Bva10g01004 802 PANTHER OS05G0345500 PROTEIN 1 801 - -
Bva10g01004 802 CDD BTB_POZ_ZBTB_KLHL-like 343 410 - -
Bva10g01004 802 SMART BACK_2 454 577 IPR011705 -
Bva10g01004 802 Gene3D - 655 800 - -
Bva10g01004 802 SUPERFAMILY POZ domain 196 295 IPR011333 -
Bva10g01004 802 Pfam BTB/POZ domain 197 295 IPR000210 GO:0005515
Bva10g01004 802 Pfam BTB/POZ domain 334 445 IPR000210 GO:0005515
Bva10g01004 802 Pfam F5/8 type C domain 681 779 IPR000421 -
Bva10g01004 802 SUPERFAMILY Galactose-binding domain-like 646 801 IPR008979 -
Bva10g01004 802 SUPERFAMILY POZ domain 332 445 IPR011333 -
Bva10g01004 802 Gene3D - 478 599 - -
Bva10g01004 802 SMART BTB_4 344 448 IPR000210 GO:0005515
Bva10g01004 802 SMART BTB_4 207 298 IPR000210 GO:0005515
Bva10g01004 802 ProSiteProfiles BTB domain profile. 344 413 IPR000210 GO:0005515
Bva10g01004 802 Pfam Farnesoic acid 0-methyl transferase 53 149 IPR022041 -
Bva10g01004 802 Gene3D Potassium Channel Kv1.1; Chain A 330 477 IPR011333 -
Bva10g01004 802 ProSiteProfiles BTB domain profile. 207 268 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01004 Bva-Chr10 7364675 7372681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01004 - - gmx:100810794 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01004 10 7364675 7372681 Bva10g01004 10 7364675 7372681 ECH