Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00986 ATGGAGCACTGTGGTGAATCCATGGTTGACTCAAGGAGTGGCTTCAGCAAATCCAATTCAATCTTTTACAGCAAGCGCAGGCCTATCCCGCTTCCTCAAAATCAATCCCTAGACGTCACCACCTTCATCGCCTCCCGTCCTCACCATGGCAGGATTGCTTTCATCGACGCCGCCACAGGGCACAACTTCACTTTCCAGCAGCTCTGGGGAGCCGTCGATGCCGTCGCCACCTCTCTCTCCGACATGGGCATCCATAAGGGTCATGTTGTCCTCCTTCTCTCTCCAAACTCCATCTACTTTCCAGTGGTGTGCCTTGCCGTCATGTCCCTGGGAGCTATAATCACCACCACCAACCCCCTCAACACACCTCGTGAAATCGCCAAGCAAATCTCCGATTCCAAGGCTGTCCTCGCCTTCACAATTGGCCCACTGGTTCCCAAAATCATAGCAACATCAGCTGATCTACCAATCATTCTGATGGGTGACAATGTGAATACCCCAGTTACTGAATCTAGAATTGTGACTACACTTGGGGAGATGATGAGGAAAGAACCCAGGGCGAGCCGACTCAAGGATCGAGTTGACCAAGAAGATACTGCAACACTGCTTTACTCATCGGGTACGACGGGTCCCAGTAAAGGAGTGGTTTCCTCGCACAGGAATCTGATGGCTATGGTGCAAATAGTTTTGGGTCGGTTCCGTTTGGAAGAGGAGCAGACCTTCATCTGCACTGTTCCTATGTTTCATATATACGGTCTAGTGGCGTTCGCAACGGGCCTTCTGGCTGCGGGATCAACAATCGTGGTGCTGTCCAAGTTCGAGATGCACGATATGCTTTCAGCGATCCACAAGTATCGCGCCACGTACCTGCCACTGGTGCCTCCCATTCTGGTGGCTATGCTGAACGGCGCTGATGAAATCAGGGGCAAATACGATTTGAGTTCGCTGCACTCGGTGTTGTCTGGCGGGGCCCCACTGAGTAAAGAGGTGATAGAGGGCTTTGTGGAGAAATACCCCAAAGTTACAATTCTTCAGGGTTATGGATTGACCGAATCAACAGGGGTTGGGGCTTCAACCGACTCCTTGGAGGAGAGTAGGAGGTACGGTACGGCTGGGTTGTTGTCCCCGAGCACGGAGGCCAAGATTGTGGACCCCGACTCAGGGGAGGCGTTACCGGTTAATCGGACCGGTGAGCTCTGGTTGAGAGGGCCCACCATCATGAAAGGTTATTTCAGTAACGAGGAAGCAACATCGTCGACCCTTGATTCAGAGGGATGGTTAAGAACAGGGGATATCTGCTACATTGATGATGATGGATACATTTTCGTTGTTGATAGGTTGAAGGAGCTTATCAAATACAAGGGATATCAGGTCCCACCAGCAGAACTTGAGGCTTTATTACTAACCCATCCAGAAATTTCAGATGCTGCTGTTATACCGTATCCAGATAAGGAGGCTGGGCAGTATCCAATGGCATATGTGGTGAGAAAAGCCGGAAGTAATATATCAGAGAAACAAGTTATGGATTTTGTGGCAAGACAGGTTGCTCCTTACAAAAGAATTCGAAGGGTCGCATTTATATCCACGATACCCAAGAATGCATCCGGCAAAATTCTTAGGAAAGATCTCATCAAGCTTGCCACATctaaaatttg 1655 0.4967 MEHCGESMVDSRSGFSKSNSIFYSKRRPIPLPQNQSLDVTTFIASRPHHGRIAFIDAATGHNFTFQQLWGAVDAVATSLSDMGIHKGHVVLLLSPNSIYFPVVCLAVMSLGAIITTTNPLNTPREIAKQISDSKAVLAFTIGPLVPKIIATSADLPIILMGDNVNTPVTESRIVTTLGEMMRKEPRASRLKDRVDQEDTATLLYSSGTTGPSKGVVSSHRNLMAMVQIVLGRFRLEEEQTFICTVPMFHIYGLVAFATGLLAAGSTIVVLSKFEMHDMLSAIHKYRATYLPLVPPILVAMLNGADEIRGKYDLSSLHSVLSGGAPLSKEVIEGFVEKYPKVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPSTEAKIVDPDSGEALPVNRTGELWLRGPTIMKGYFSNEEATSSTLDSEGWLRTGDICYIDDDGYIFVVDRLKELIKYKGYQVPPAELEALLLTHPEISDAAVIPYPDKEAGQYPMAYVVRKAGSNISEKQVMDFVARQVAPYKRIRRVAFISTIPKNASGKILRKDLIKLATSKI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00986 551 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Bva10g00986 551 SUPERFAMILY Acetyl-CoA synthetase-like 40 549 - -
Bva10g00986 551 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Bva10g00986 551 Gene3D - 449 550 IPR045851 -
Bva10g00986 551 PANTHER BNAA06G14440D PROTEIN 9 550 - -
Bva10g00986 551 Pfam AMP-binding enzyme 47 453 IPR000873 -
Bva10g00986 551 CDD 4CL 31 543 - -
Bva10g00986 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 550 - -
Bva10g00986 551 Gene3D - 19 448 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00986 Bva-Chr10 7273831 7276238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00986 8 551 Monolignol Biosynthesis Gene Families AT1G20500 65.091 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00986 K10526 - pvy:116112622 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00986 10 7273831 7276238 Bva10g00986 10 7273831 7276238 ECH