Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00978 ATGGTGGACGAGAGCGCAGCCTTGAATTCTATCGGGGAACCGGAGTTGGAGAATGTTATCCCTACCGGCTCCGAAGCTGAAAACCAGCTCTGCGACGGCAAAGACGCCTCGTGCTTTTCGAAAGAAGTTTTCGACGGTTTGCCTTCCGATGCCGTGAAGGAGTTGTTGTCCCTCGGGATTTGTGTGCGCTGCATCTTGAGGCTGTTTGGGGTCCAAGGGCACATTTATTCATGTCTGTCACTGTCAACATCAATGTTGATTTCCATACTTGGACAGCCAACAGATTTGGGCAAAGATATGGTGGATAGTGATTTtagaaaatgtgaaatttcaTTTAGTTCCAAGGAATCTAGACCCGAGGCTACACTTTGCAGACTTTGCTTAGGCATCCTGCAGTTCAGATTTAATGATGACAGAGCAATGCTGGTGGAAAAGAATAGTTCTCATGATTTGGCTGTTTTGATTGCAGACACGGTTAAACAAGAGGGCCATCAAATTGATAGCTTTTCCCTCGAAGTTTCCATACCGCCAGATATTCTTGAAAATGACTGCTCAGTTTGGTCGTACGTGAAAATCAAGTATGGAGATGAACCCTGGTTCCAAGAAAAGTTACATTTAGGATCCATTTCTGTAAAAGACGCCTTAAAACTCTCTCTAGTAAATTCTCTTGAAAGTCTTCTGAATTGTAAAACTAGTGTGAGCTCTTTCCGTATCCGTTTGACATACAATCAAACTACAACATCAAAAAAGGCTGACAAGTTTTCAGTTGATAAAGGGAGttgcaagagaagaaaaacagGCACTGATAATAGTGTAGAATCTGTCAAGGAGACCCTGGTTCCTTGTACCCAATGTCTGGATCCTATTATGGGTGAACCCAACCTAGTTGGGGAAAGGCCTTTCAGCAATTCGCTAGAAAATGAATCCTCTAACTGCTGTAAATTCTTGCTACaaaagATAAATGACCCTTGCCATTTTACAGTCTATTGCTACAGAACACCAGTCTATTTTGGTGGAAGATACTTGAAGTATTCAAGGAATGTGAGTCAAACGCGCTGGATaattgatgatgaaagaatGGGGGAAGCATCTGTTGAGGAAATTATTGGTGTAAACATCATCCAGGCATGCCGTGGtgataattacaaatttcatGCTGCTGGCAGGGAGGATATTGATGTTCGAATGTTGGGTTCGGGCAGGCCATTTCTTGTTGAGGTGCAAAATGCACGACAAGTCCCATCTGAACTGTTTGTAAAAGATatagagaaaacaataaataacttGGAAAATAAATTGGTTAGGgtgaaaaatctgaaaatggTTGGTAGTCATGGATGGGACCTAATGCGTGAGGGAGAAGCAGAGAAACAGAAGCAATATGCCGCTCTAGTGTGGATTTCTCGTCCGCTGAAAGACGAAGATTTGCAGTCTGTGTCTTTGCTTAAGGATGTCAGAATTTTGCAGAGAACCCCAATAAGGGTGTTACATCGCCGTAGTCCTTTGGACCGTGAAAAGATTATTCACTGgatgaaaatagagagaattgCTGGAAGTTcccaatattttcttttgcatctaTGTACACAgGCTGGAACGTACATCAAAGAATTTGTTCATGGGGATCTTGGACGCACCCATCCTAGCGTTGGATCAATTTTGGGTTGTAGAGCTGAAATTGTACAACTTGATGTCACAAACGTGAAAATGGATTGTTTCCTAACTTG 1727 0.3949 MVDESAALNSIGEPELENVIPTGSEAENQLCDGKDASCFSKEVFDGLPSDAVKELLSLGICVRCILRLFGVQGHIYSCLSLSTSMLISILGQPTDLGKDMVDSDFRKCEISFSSKESRPEATLCRLCLGILQFRFNDDRAMLVEKNSSHDLAVLIADTVKQEGHQIDSFSLEVSIPPDILENDCSVWSYVKIKYGDEPWFQEKLHLGSISVKDALKLSLVNSLESLLNCKTSVSSFRIRLTYNQTTTSKKADKFSVDKGSCKRRKTGTDNSVESVKETLVPCTQCLDPIMGEPNLVGERPFSNSLENESSNCCKFLLQKINDPCHFTVYCYRTPVYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGVNIIQACRGDNYKFHAAGREDIDVRMLGSGRPFLVEVQNARQVPSELFVKDIEKTINNLENKLVRVKNLKMVGSHGWDLMREGEAEKQKQYAALVWISRPLKDEDLQSVSLLKDVRILQRTPIRVLHRRSPLDREKIIHWMKIERIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEIVQLDVTNVKMDCFLT 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00978 575 Coils Coil 419 439 - -
Bva10g00978 575 PANTHER UNCHARACTERIZED 306 570 IPR039894 -
Bva10g00978 575 PANTHER UNCHARACTERIZED 42 271 IPR039894 -
Bva10g00978 575 SUPERFAMILY Pseudouridine synthase 455 569 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bva10g00978 575 Gene3D - 334 458 - -
Bva10g00978 575 PANTHER BNAC07G15400D PROTEIN 306 570 - -
Bva10g00978 575 PANTHER BNAC07G15400D PROTEIN 42 271 - -
Bva10g00978 575 Gene3D - 459 569 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00978 K07583 - vvi:100242087 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00978 10 7225480 7231637 Bva10g00978 10 7225480 7231637 ECH