Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00975 ATGGGAGATACAGAGAGTTGCAGTAGCAGAGCTTTCAATACTGGGTGGAATGAGGATCGAAAACAGAGGCTAAAGGTTGAAGTTTACAATGAAGTTCTTAGTCGACTTAGGGAATTGAATGTCCCAGAGGCTGCGGTACCTGGTTTTGAAGATGAGCTTTGGACGCATTTCTATCGGCTTCCCACTAGGTATGCACTTGATATGAATGTGGAAAGGGCCCAAGACGTTCTTATGCATAAAAGGTTACTTCATATGGCACTTGCGCCTTCTACTAGACCTGCGGTTGAAGTCCGTCTTGTGCAGGTTCGTTATGTTTCTGGTGTGAACCGtagtatttttcttcattcaaaCTCTCAAAGAGAAGTCAGTACTCAAGATTCATATATTCCAGGCAACACAAGCGTTCATCCACCCCCAGCCTTTGGTTTGTCTGCTAACCTTCAACTTGCTCTTGAAACAAGCCAGTTACAAGTTCAAGACAGAAGTAGCAACCTGCCCTTTTGTACAAATTATTCCTgCCCATTGCATGAAATCACGATTTCAACAATAGACAAGCCAAAACTTCTCAGTCAGTTGACTTCGTTACTGTCTGAGACTGGGCTGAACATTCAAGAAGCACATGCTTTTTCCACGTTGGATGGCTATTCACTGGATGTTTTTGTTGTTGGTGGTTGGGTAGTTGAGGATACTGAGAAGCTAAAACATGTTCTGACAGAGAAAATTCAGAAACATGAGAAGGAAACTCCACTCGAAGAAAGTAGCAATCTTCCCACTGCAGTTCAAGAGCAAACAGGGATCAACTACATCTGTAATTATATAAATCGGGGAAATGATATCTGGGAAGTTGATACGAGctgtttgaaatatgaaataaagatTGCGTCTGGTTCTTTCAGTGATCTGTATAAAGGCACTTTCAATAATCATGATGTGGCTATCAAAGTCCTCAAGACTGAGAATCTGAATGAAAGTATACAGAAGGAATTCGCTCAAGAAGTCTATATCCTAAGTAAAATCCAGCACAAGAACATTGTCCAGTTTGTTGGTGCCTGTACAAAACCTCCAAACTTATGCATCGTCACAGAATATATGTCTGGTGGAAGTATGTATGACTTGCTGCATAAACAGAAGGCTGGCCTTACTCTTCCATCCTTGCTCAGAGTTGCAATTGATGTTTCTGAAGGAATGAACTATTTGCATCAGAATGATATTTTACATAGAGACCTTAAAGCTGCCAATCTTTTGATGGATGAGAAAGGGGTAGTTAAGCTTGCTGATTTTGGCGTGGCCAGAATGCAAGATCAATCTGGTATCATGACTGCAGAAACTGGAACTTATCGGTGGATGGCTCCAGAGGTTATTGAACATAAGCCATACGATCACAAAGCCGATGTTTTCAGCTTTGGGATTGTTCTATGGGAGCTGCTCACAGGAAAGCTTCCTTATGAACATTTGTCTCCATTGCAAGCAGCAGTCGGCGTGATACAGAAGAGAAATGCTGTTGCTGAAGAACACTGCAGTGCTGTAATATCTAAATGGAGCGGATTGAGGCCCAAAATTCCAAGGCATACTCATTCAGAGCTTGTGGAATTGCTTCGTCAATGCTGGCGCCAAGATCCATCTTTGAGACCCGAATTCGCAGAAATTCTGGAATTTCTGCAGCGTCTGGCCAACAGGGTTGCAGGCGCAGTTGGAGGTGATTA 1703 0.4187 MGDTESCSSRAFNTGWNEDRKQRLKVEVYNEVLSRLRELNVPEAAVPGFEDELWTHFYRLPTRYALDMNVERAQDVLMHKRLLHMALAPSTRPAVEVRLVQVRYVSGVNRSIFLHSNSQREVSTQDSYIPGNTSVHPPPAFGLSANLQLALETSQLQVQDRSSNLPFCTNYSCPLHEITISTIDKPKLLSQLTSLLSETGLNIQEAHAFSTLDGYSLDVFVVGGWVVEDTEKLKHVLTEKIQKHEKETPLEESSNLPTAVQEQTGINYICNYINRGNDIWEVDTSCLKYEIKIASGSFSDLYKGTFNNHDVAIKVLKTENLNESIQKEFAQEVYILSKIQHKNIVQFVGACTKPPNLCIVTEYMSGGSMYDLLHKQKAGLTLPSLLRVAIDVSEGMNYLHQNDILHRDLKAANLLMDEKGVVKLADFGVARMQDQSGIMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEHLSPLQAAVGVIQKGLRPKIPRHTHSELVELLRQCWRQDPSLRPEFAEILEFLQRLANRVAGAVGGD 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00975 550 Pfam Protein tyrosine and serine/threonine kinase 288 536 IPR001245 GO:0004672|GO:0006468
Bva10g00975 550 CDD STKc_MAP3K-like 293 536 - -
Bva10g00975 550 SUPERFAMILY Protein kinase-like (PK-like) 268 536 IPR011009 -
Bva10g00975 550 SUPERFAMILY ACT-like 175 248 IPR045865 -
Bva10g00975 550 ProSiteProfiles ACT domain profile. 177 255 IPR002912 -
Bva10g00975 550 Coils Coil 227 247 - -
Bva10g00975 550 SMART serkin_6 287 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00975 550 Gene3D Transferase(Phosphotransferase) domain 1 366 546 - -
Bva10g00975 550 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 539 - -
Bva10g00975 550 ProSiteProfiles Protein kinase domain profile. 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00975 550 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 539 - -
Bva10g00975 550 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Bva10g00975 550 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Bva10g00975 550 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Bva10g00975 550 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Bva10g00975 550 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672|GO:0006468
Bva10g00975 550 Gene3D Phosphorylase Kinase; domain 1 277 365 - -
Bva10g00975 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00975 Bva-Chr10 7192094 7199365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00975 5 544 MAP Kinase Kinase Kinase AT4G35780 57.143 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva10g00975 PK_Tyr_Ser-Thr 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00975 - - aprc:113864606 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00975 10 7192094 7199365 Bva10g00975 10 7192094 7199365 ECH