Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00974 ATGCCGAGCTTTTGGAGAAGTTATTCGAAAATCAACCGTGTTCCTTtaccaaacaaacaagaaccaaaagaagaaCGTGAGCCTCTGCTGCTATTGCGTCAAGAAAATAGCAATCAGATGGCCCAAAAAGAAGTCGTGGTTGATTTTGATGGTAACTATGGCCTTGACTACTTGCATGAAAACTCCCACGCCTCAAAAAGGAAGGAGGATTCTGAGGAGGAGGAAAAGCTCCAACAGACTATATATTCAAGAGAAGAAATTCCGAAGTTCAGTCGAAATGGTTCATTTCAAGGACTCAGATGGAGATCTCACTTGAACAGGACAAAGTCAAGGCTAATTGACCCACCACATGAATCATGTGCAAGCTCAGATGAAGTGAACAATGGAAGACAAccagagagaaagaaagataaagatgTGGAGGTGGACGATGTTGAGGACCTCCCAGAAGAATTCAAGAGAATAAGGTTTAGTCTATTTTATGTACTCCAATGGATTAGTCTTGCTTCGATACTAGCAGCTTTGGTTTCTAACCTTTGGGTTCCTGACATTGGGAGGCTAAAGCTCTGGGACCTTCCTCTGTGGAAATGGGAGATAATGATTTTGGCACTAATTTGTGGACGTTTGGTGTCAGGGTGGGTAATTAAGGTGGTTGTGTTTTTCGTTGAACGCAATTTCATCTTGCGGAAACGGGTTCTGTATTTTGTGTACGGGTTGAAGAACGCTGTGAAGAACTGCATCTGGTTGGGTCTGGTTTTACTGGTCCTTGCTTTGTCCTTCCACGTCAAAGCATTCTTCCAACGAATTCGAGAGGCACTGTTCAAGCAGTATGTCATTGAAACACTCTGTGGTCCTCCATTAATAGAACATGAAACTGAGGCCAGTGGGTCAGGGCCGTCAACTCCTATTACAAGCGCAGGACTGCAATGGAACTCCACAATCAGGAAAAGTAGCAAGTTCTCAAGGTCAAGGTCATCGTCTAGGAAATCGAAGCAGCAAGGAGGAATCACAATTGATCAATTGGATAAGCTGAACCGGAGAAATATATCAGCCTGGAACATGAAGAGGATGATCAGTACAATTCGGCATGGGGCGTTTAACACTCTGGATGAACAGATACTAAATTCTGACATTGAGGATGAGTCTTCGCAGAAAATTAGAAGCGAATGCCAGGCAAAAGAAACTGCCCAGAAAATCTTTCATAATGTCGCAAAAACACGATACATTTTCCTGGAAGATGTGAGGAAATTTATGCGCGAAGATGAAGCTTTGAAGACAATGGATCTGTTAGGAGCAGTATCTGCAGAACATGGCATTAGCAAGTCCTCTCTTCGAGATTGGATgGTGAATGCATTCAGAGAGAGAAGAGCGCTTGCATTGTCTCTCAATGACACAAAAACTGCTGTAGACGAACTCCATAACATATTAAACATCCTTGTAGCTTTCatcattttgataatatgGCTTGTCATACTTGGAGTTCCAATTCGTCACTTTCTAGTGTTCTTAAGTTCCCAGGTTCTTTTGGTGGTGTTTATGTTTGGGAATACCTGCAAGACGGTTTTTGAAGCAATCATATTCTTGTTTGTGATGCACCCATTTGATGTTGGTGATCGTTGTGAAGTAGATGGAGTCCAGATGGTAGTGGAAGAGATGAATATACTAACCACAGTTTTCTTGAGGTACGATAACCAAAAGATTATATACCCAAATAGTGTTCTATCTACCAAACCCATCAGTAATTATCAGCGCAGTCCAGATATGGGAGACATAATTGATTTCTGTATCCACATCTCAACTCCAATTGAGAAAGTTTCTActatgaaagaaagaataatagaGTATATTGAAAGGAAGAATGAACACTGGCATCCAGAACCAATGGTGATAATCAGGGATGTGCAAGACTTGAACAAATTGAACATGTCAGTGTGGCTAACACACAGAATGAACTTTCAGGACAATAAAGAGAGATGGAGTAGGAGAACCCAATTGGTTGAAGAGatgatcaaaatattcaaacaaCTGGATGTTGAGTACCGTCTGCTTCCTCTTGATGTTAATGTCAGATATCTCCCCACTCTCACCTCCAATAGGTTTCCTTCCACTTGGACAACTTTTGCCGCCTG 2129 0.4011 MPSFWRSYSKINRVPLPNKQEPKEEREPLLLLRQENSNQMAQKEVVVDFDGNYGLDYLHENSHASKRKEDSEEEEKLQQTIYSREEIPKFSRNGSFQGLRWRSHLNRTKSRLIDPPHESCASSDEVNNGRQPERKKDKDVEVDDVEDLPEEFKRIRFSLFYVLQWISLASILAALVSNLWVPDIGRLKLWDLPLWKWEIMILALICGRLVSGWVIKVVVFFVERNFILRKRVLYFVYGLKNAVKNCIWLGLVLLVLALSFHVKAFFQRIREALFKQYVIETLCGPPLIEHETEASGSGPSTPITSAGLQWNSTIRKSSKFSRSRSSSRKSKQQGGITIDQLDKLNRRNISAWNMKRMISTIRHGAFNTLDEQILNSDIEDESSQKIRSECQAKETAQKIFHNVAKTRYIFLEDVRKFMREDEALKTMDLLGAVSAEHGISKSSLRDWMVNAFRERRALALSLNDTKTAVDELHNILNILVAFIILIIWLVILGVPIRHFLVFLSSQVLLVVFMFGNTCKTVFEAIIFLFVMHPFDVGDRCEVDGVQMVVEEMNILTTVFLRYDNQKIIYPNSVLSTKPISNYQRSPDMGDIIDFCIHISTPIEKVSTMKERIIEYIERKNEHWHPEPMVIIRDVQDLNKLNMSVWLTHRMNFQDNKERWSRRTQLVEEMIKIFKQLDVEYRLLPLDVNVRYLPTLTSNRFPSTWTTFAA 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00974 709 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 255 702 - -
Bva10g00974 709 Pfam Mechanosensitive ion channel 474 678 IPR006685 GO:0016020|GO:0055085
Bva10g00974 709 Gene3D - 533 582 IPR023408 -
Bva10g00974 709 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 37 255 - -
Bva10g00974 709 PIRSF Memb_At2g17000 254 709 IPR016688 -
Bva10g00974 709 PIRSF Memb_At2g17000 6 256 IPR016688 -
Bva10g00974 709 MobiDBLite consensus disorder prediction 112 142 - -
Bva10g00974 709 MobiDBLite consensus disorder prediction 128 142 - -
Bva10g00974 709 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 255 702 IPR016688 -
Bva10g00974 709 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 37 255 IPR016688 -
Bva10g00974 709 MobiDBLite consensus disorder prediction 315 335 - -
Bva10g00974 709 SUPERFAMILY Sm-like ribonucleoproteins 523 582 IPR010920 -
Bva10g00974 709 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00974 Bva-Chr10 7188545 7191596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00974 23 709 Mechanosensitive Ion Channel Family AT1G78610 46.899 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00974 K22048 - qsu:112009310 737.643