Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00965 ATGGGCCTCTGCTTTAGCAAATCACACAAAAACCCAAACTCATCCTCCTCTTCCTCTGATTCTTCACCCAATCATTACCAACAATTACCGACGAGAACCCACGAAGAACAGCCTCATCGCCCATACCGTGCTGCATACTCAGCACCTTCTTCATACTATCCAAACAAAGGTTCTTCGTCTTCTCAAGTTGTAACCATTTTAGGTAAACCATACACTGACATAAACGTGCTTTATACTCTTGAGAAAGAATTGGGAAGGGGCCAATTTGGAATTACTTATCTTTGCACTGAGAAGGCGACGGGTAGAAAGTACGCATGTAAGTCCATAGCGAGGCGAAAGCTAACACGCAAGAAAGAAATCGATGATGTCAAGAGGGAAATTTTGATCCTACAGCACCTAACGGGTCAACCCAATATAGTGGAATTTAAGGGTGCTTATGAAGATAGACATAACGTGCATTTAGTAATGGAGTTGTGCTCAGGTGGTGAGCTTTTTGATCGAATTATTAGAAGAAGGAATTACTCGGAGAGGGAAGCTGCATCTATTTTCAGGCAAATTGTGAATGTGGTTCATGTTTGTCATTTTATGGGGGTTATGCATAGAGACTTGAAGCCTGAGAATTTCTTGCTGGTTAGTAGGGATGAGAAGTCACCATTAAAAGCCACCGATTTCGGACTCTCTGTCTTCATAGAGGAAGGTAAAGTGTACAGGGACATTGTTGGGAGTGCCTACTATGTAGCTCCAGAAGTTTTAAACCGAAATTATGGAAAGGAGATAGATGTCTGGAGTGCCGGGGTTATTCTATACATCCTCCTAAGTGgggttcctccattttgggctGAGAACGAAAAAGGCATCTTTGAAGCTGTTCGGAAAGGAGACTATGATTTGCAAAGCTCACCATGGCCTTCTATTTCAGCTGCTGCAAAGGATCTGATCAGGAAAATGTTGACTTATGACCCTAAGAAACGCATTACAGCAGCTGAAGCTCTTGAACACCCATGGATGAAGGAAGGTGGTGAAGCATCTGACAAGCCCATAGACAGTGCTGTATTTAAAAGGATGAAACAATTTAGGGCAATGAACAAGATGAAGAAGCTTGCTCTAAAGgTAATAGCAGAGAGCCTTtcagaagaagaaattcagGGCTTGAAACAAATGTTCAACAATATGGACACTGATGGCAGTGGTACTATAACGTTTGAAGAACTCAAAACTGGATTGTCCCGACTGGGATCTAAACtcagtgaaaatgaaataaagcaaCTGATGGAAGCAGCTGATGTTGACAGGAGTGGGTCCATTGATTATATTGAATTCATCACTGCCACTATGCATCGGCATAGACTTGAGAGGGAAGAGAACTTGTATAAAGCTTTCCAATACTTTGACAAGGATAACAGCGGTTTTATAACAAGAGATGAGATTAGACAAGCTATGACTGAATATGGAATGGGTGATGAAGCTACCATAGATGAAGTCATTAATGATGTTGATACTGATAGAGATGGCAGAATTAATTATGAAGAGTTTAAGGCTATGATGAGAAAGGCAATCCGCGGTCTTTATCTCTTGTGCTTTCTCATTTCGCGGAACCGGAAGAGTGAGGACATGCTCCCTCCGCTTCACTCTTCGATTTCGATAGTTTGCCCGCCTTCCACAGCAAAAGCATTTCAAACATCAccttctctcttctccttctccacTCGGAAAACTAAGTTTCCATTTAGATCCAGTTCTAATTTCTCTGTAGACTCCAACTCCGGCGGAGTGCAAGAGCATCTCGCTGTTAAGAGGGCGAATTACGGCGGCGTACGATTGGATGATGCAGTCGAAGTTAAGTCAGGTAAAGTCAGGCTTGATAGTTGGATCTCTTCTCGCATTGGCGGTATCAGTAGAGCTCGCGTTCAATCAAGTATCAGAGCGGGCCTCGTTTATGTAAATGGTCGTCTTGTCGATAAGGTTTCTTTTAATGTCAAAGCTGGTGATAAGATAACTTGCACAATCGCAGAGCTTCAACAGCTGAAGGCTGAGCCAGAAAATATACCTTTGGATATAGTCTACGAGGATGAGCATGTACTAGTTATTAATAAACCTGCACACATGGTTGTGCATCCGGCACCAGGAAACACATCTGGTACACTTGTCAATGGCATTCTTCACCATTGCAGCCTACCAGATGTTGAATTTTCTAAAGAGGAAACTCTTTCACAAACCGAAGATTCTGATGATGAGTTGAGTAGCTTCTGCGTGCATTCAAATTCTAGTAAAGCATCTGTTCGCCCGGGGATTGTGCACAGATTGGACAAAGGCACAAGTGGATTACTTGTTGTAGCAAAGGATGAGCATTCTCATATCCATTTGTCAGAACAATTCAAGCTAAGAACTATTGAAAGGGTGTATGTTAGTCTTACTACCGGGGTACCCACCCCGCTTGGTGGGCGGGTTGAAGTTCCAGTTGGCCGTGATCTTAATAACCGGCTTCGAATGACTGCTGTAGCTGGATCGGGAAATGCTAGCAAGGCCCGTCATGCTGCTAGTAGGTACAAGGTAATTGAGATTCTGGCCAGGGGTGGCTGCGCGTTGGTTGAATGGAGGTTAGAAACTGGACGCACTCATCAGATCCGTGCACACGCCAAGTATCTTGGAGTTCCGCTGTTGGGTGATGAGGTATACGGAGGGACAAAGGGCATGGCATTGTCGTTGCTTCGGCCCAGAACTCCCCCTAGCTTGCATAACGAAATTTCACAAATGGTTTCTAGGCTAGAGAGGCCTTGCCTGCATGCTTTGACTCTTGGGTTTCAGCATCCGCACAGGGGAGAGAACGTTCACTTTTCATGTCAACCCCCAGTAGACTTCTATGAGATTTTGAACCAGCTTCGTAGAATTGGCAGTGAGAGGATATCTTCGTCATCAGTTCCTTCGTCGGGCAGACAGACACTGTA 2945 0.4289 MGLCFSKSHKNPNSSSSSSDSSPNHYQQLPTRTHEEQPHRPYRAAYSAPSSYYPNKGSSSSQVVTILGKPYTDINVLYTLEKELGRGQFGITYLCTEKATGRKYACKSIARRKLTRKKEIDDVKREILILQHLTGQPNIVEFKGAYEDRHNVHLVMELCSGGELFDRIIRRRNYSEREAASIFRQIVNVVHVCHFMGVMHRDLKPENFLLVSRDEKSPLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLNRNYGKEIDVWSAGVILYILLSGVPPFWAENEKGIFEAVRKGDYDLQSSPWPSISAAAKDLIRKMLTYDPKKRITAAEALEHPWMKEGGEASDKPIDSAVFKRMKQFRAMNKMKKLALKVIAESLSEEEIQGLKQMFNNMDTDGSGTITFEELKTGLSRLGSKLSENEIKQLMEAADVDRSGSIDYIEFITATMHRHRLEREENLYKAFQYFDKDNSGFITRDEIRQAMTEYGMGDEATIDEVINDVDTDRDGRINYEEFKAMMRKAIRGLYLLCFLISRNRKSEDMLPPLHSSISIVCPPSTAKAFQTSPSLFSFSTRKTKFPFRSSSNFSVDSNSGGVQEHLAVKRANYGGVRLDDAVEVKSGKVRLDSWISSRIGGISRARVQSSIRAGLVYVNGRLVDKVSFNVKAGDKITCTIAELQQLKAEPENIPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCSLPDVEFSKEETLSQTEDSDDELSSFCVHSNSSKASVRPGIVHRLDKGTSGLLVVAKDEHSHIHLSEQFKLRTIERVYVSLTTGVPTPLGGRVEVPVGRDLNNRLRMTAVAGSGNASKARHAASRYKVIEILARGGCALVEWRLETGRTHQIRAHAKYLGVPLLGDEVYGGTKGMALSLLRPRTPPSLHNEISQMVSRLERPCLHALTLGFQHPHRGENVHFSCQPPVDFYEILNQLRRIGSERISSSSVPSSGRQTL 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00965 981 SUPERFAMILY Protein kinase-like (PK-like) 78 337 IPR011009 -
Bva10g00965 981 ProSitePatterns EF-hand calcium-binding domain. 464 476 IPR018247 -
Bva10g00965 981 ProSiteProfiles S4 RNA-binding domain profile. 618 691 - -
Bva10g00965 981 ProSiteProfiles EF-hand calcium-binding domain profile. 415 450 IPR002048 GO:0005509
Bva10g00965 981 Gene3D Pseudouridine synthase 675 949 - -
Bva10g00965 981 Gene3D - 604 674 IPR036986 GO:0003723
Bva10g00965 981 MobiDBLite consensus disorder prediction 7 31 - -
Bva10g00965 981 CDD PseudoU_synth_RluA_like 693 934 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bva10g00965 981 SMART s4_6 618 683 IPR002942 GO:0003723
Bva10g00965 981 TIGRFAM rluA_subfam: pseudouridine synthase, RluA family 617 961 IPR006225 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bva10g00965 981 CDD S4 618 697 - -
Bva10g00965 981 MobiDBLite consensus disorder prediction 1 40 - -
Bva10g00965 981 Pfam RNA pseudouridylate synthase 692 879 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bva10g00965 981 Gene3D Phosphorylase Kinase; domain 1 80 163 - -
Bva10g00965 981 CDD STKc_CAMK 78 335 - -
Bva10g00965 981 Pfam EF-hand domain pair 384 444 IPR002048 GO:0005509
Bva10g00965 981 Pfam EF-hand domain pair 453 516 IPR002048 GO:0005509
Bva10g00965 981 SUPERFAMILY Pseudouridine synthase 678 961 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bva10g00965 981 Gene3D Transferase(Phosphotransferase) domain 1 164 343 - -
Bva10g00965 981 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 522 - -
Bva10g00965 981 Gene3D - 344 519 - -
Bva10g00965 981 ProSiteProfiles EF-hand calcium-binding domain profile. 487 521 IPR002048 GO:0005509
Bva10g00965 981 ProSitePatterns Rlu family of pseudouridine synthase signature. 765 779 IPR006224 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Bva10g00965 981 SMART efh_1 455 483 IPR002048 GO:0005509
Bva10g00965 981 SMART efh_1 419 447 IPR002048 GO:0005509
Bva10g00965 981 SMART efh_1 383 411 IPR002048 GO:0005509
Bva10g00965 981 SMART efh_1 490 518 IPR002048 GO:0005509
Bva10g00965 981 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 37 522 - -
Bva10g00965 981 Pfam Protein kinase domain 78 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00965 981 Pfam S4 domain 618 665 IPR002942 GO:0003723
Bva10g00965 981 SUPERFAMILY EF-hand 376 516 IPR011992 -
Bva10g00965 981 ProSitePatterns EF-hand calcium-binding domain. 499 511 IPR018247 -
Bva10g00965 981 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Bva10g00965 981 ProSiteProfiles Protein kinase domain profile. 78 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00965 981 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Bva10g00965 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Bva10g00965 981 SUPERFAMILY Alpha-L RNA-binding motif 617 705 - -
Bva10g00965 981 ProSitePatterns EF-hand calcium-binding domain. 428 440 IPR018247 -
Bva10g00965 981 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Bva10g00965 981 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Bva10g00965 981 SMART serkin_6 78 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00965 Bva-Chr10 7144098 7154515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00965 1 516 EF-hand Containing Proteins AT3G20410 66.667 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva10g00965 Pkinase 1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00965 K13412 - fve:101297901 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00965 10 7144098 7154515 Bva10g00965 10 7144098 7154515 ECH