Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00964 ATGGGGCTTGCGTTCATCAAGGGGTTGTGCTTTGGTACCAAAACCCGTGAAATTCCGATTGTATCCATAGATTCCTCTCCTACTCCTTCTGGTATCCAAGAAAAGCCCAGCGAAACCCATTATGAGTTCAAACCAAGCCTTCCTCCTGTGCCTACCCAATCTTCACAAACAGGGCCAGTTTTAGGAAAACCCTACATCAATGTAAATTTgatttacaaaattgaaaaagaattggGAAGAGGAGCGTCTGGGGTGACTTATCTATGCACAGAGAAGGCGACAGGAAGAAAGTATGCATGCAAGACGATAGCGAGGAGGAAGCTGGTGAAAAGGGAAGACATTGAAGACGTTAGGAGAGAAGTTCTGATTCTGCAGCATCTTTCAGGGCAGCCCAATATTGTGGAATTCAGAGGCGCTTATGAGGACCAGCAGAACGTGCACTTGGTGATGGAGTTGTGTAGCGGCGGTGAGCTCTTTGACCGTATAATTGCCAAGGGGATTTACTCGGAGCGTGAAGCGGCTGCGCTCTTCAGGCAGATTATGAATGTAGTTCATGTTTGCCATTTCATGGGTGTCATGCATCGTGACCTAAAGCCTGAGAATTTCTTGTTGGCCAGCAAGGACGCCAATGCCGCCATTAAAGCGACGGACTTTGGACTCTCCGTCTTTATTCAGCCAGGTTA 683 0.4627 MGLAFIKGLCFGTKTREIPIVSIDSSPTPSGIQEKPSETHYEFKPSLPPVPTQSSQTGPVLGKPYINVNLIYKIEKELGRGASGVTYLCTEKATGRKYACKTIARRKLVKREDIEDVRREVLILQHLSGQPNIVEFRGAYEDQQNVHLVMELCSGGELFDRIIAKGIYSEREAAALFRQIMNVVHVCHFMGVMHRDLKPENFLLASKDANAAIKATDFGLSVFIQPG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00964 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Bva10g00964 227 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 39 227 - -
Bva10g00964 227 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Bva10g00964 227 Pfam Protein kinase domain 72 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00964 227 SMART serkin_6 72 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00964 227 MobiDBLite consensus disorder prediction 24 58 - -
Bva10g00964 227 SUPERFAMILY Protein kinase-like (PK-like) 72 226 IPR011009 -
Bva10g00964 227 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 227 - -
Bva10g00964 227 Gene3D Transferase(Phosphotransferase) domain 1 158 227 - -
Bva10g00964 227 ProSiteProfiles Protein kinase domain profile. 72 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00964 227 Gene3D Phosphorylase Kinase; domain 1 73 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00964 Bva-Chr10 7144098 7146629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00964 25 227 EF-hand Containing Proteins AT5G12180 63.547 7.63e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva10g00964 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00964 K13412 - cit:102619481 304.293