Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00951 ATGGCTCAAACAACTCCCAATCACACACAGACAGTTTCTGGATGGGCAGCCCATGATTCTTCTGGCAAGGTTACTCCTTACACTTTCAAAAGAAGGGAGAACGGCGTTAACGATGTGACCATAGAGATACTGTATTGTGGGATTTGCCACACTGACCTCCACCATGCCAGAAATGACTGGGGCATCACCATGTACCCTGTAGTGCCAGGGCACGAGATCATTGGGGTGATAACAAAGGTGGGAAGCAATGCGAAGGGGTTTAACGAAGGAGACAGAGTAGGGGTGGGTTGTTTGGCGGCCACATGTTTGAACTGCGAGTTCTGCAACACCGGCCAGGAGAATTACTGTGAACAGTTGCAGTTTACATATAATGGTATTTTCTGGGATGGAAGCATCACCTACGGTGGCTATTCAAACATGCTTGTCGCCGATTACAGATATGTGGTGCATATTCCGGCAAACCTGGCAATGGATGCAGCGGCACCACTGCTGTGTGCAGGAATAACAGTGTTCAGTCCCTTAAAGGACCACAATTTAGTTGACTCACCCGGAAAAAGGATTGGTGTGGTTGGTTTGGGAGGTCTTGGACACATGGCAGTCAAATTTGGCAAGGCATTTGGCCACCACGTCACCGTTATCAGCACCTCTCCATCCAAAGAAACCGAGGCCAAGCAGCGATTGGGAGCCGATGATTTCGTACTTAGCACCAACCCCAAGCAAATGCAGGCTGCCAGGAGAACCTTGGATTTCATTTTGGACACTGTATCTGGGAATCACGCTCTTTTGCCCATCCTGGAAATGCTCAAAGTAACTGGGACATTGTTTATCGTTGGGGCACCGGACAAGCCCTTGGAATTGCCTTCTTTCCCATTGATAtttgGGAAAAGGTCAGTGAAAGGTGGGATTATAGGAGGAATAAGAGAAACACAAGAAATGTTGGACGTGTGTGGGAAGCACAACATAACGTGTGACATTGAGTTAATCCAACCTGACCAAATCAATGAGGCTATGGATCGCCTTTCTAGGAATGATGTCCGATATCGTTTTGTTATTGATATTGCTGGAAACTCAAACACGGCCAATTA 1085 0.4728 MAQTTPNHTQTVSGWAAHDSSGKVTPYTFKRRENGVNDVTIEILYCGICHTDLHHARNDWGITMYPVVPGHEIIGVITKVGSNAKGFNEGDRVGVGCLAATCLNCEFCNTGQENYCEQLQFTYNGIFWDGSITYGGYSNMLVADYRYVVHIPANLAMDAAAPLLCAGITVFSPLKDHNLVDSPGKRIGVVGLGGLGHMAVKFGKAFGHHVTVISTSPSKETEAKQRLGADDFVLSTNPKQMQAARRTLDFILDTVSGNHALLPILEMLKVTGTLFIVGAPDKPLELPSFPLIFGKRSVKGGIIGGIRETQEMLDVCGKHNITCDIELIQPDQINEAMDRLSRNDVRYRFVIDIAGNSNTAN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00951 361 Gene3D - 15 353 - -
Bva10g00951 361 MobiDBLite consensus disorder prediction 1 20 - -
Bva10g00951 361 CDD CAD1 14 352 - -
Bva10g00951 361 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Bva10g00951 361 SUPERFAMILY GroES-like 17 180 IPR011032 -
Bva10g00951 361 MobiDBLite consensus disorder prediction 1 18 - -
Bva10g00951 361 PANTHER ALDEHYDE REDUCTASE 1 357 - -
Bva10g00951 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Bva10g00951 361 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 357 - -
Bva10g00951 361 Gene3D - 166 323 - -
Bva10g00951 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 321 IPR036291 -
Bva10g00951 361 SMART PKS_ER_names_mod 17 351 IPR020843 GO:0016491
Bva10g00951 361 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00951 Bva-Chr10 7087238 7089662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00951 14 356 Monolignol Biosynthesis Gene Families AT2G21890 57.143 1.14e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00951 K00083 - gmx:100820588 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00951 10 7087238 7089662 Bva10g00951 10 7087238 7089662 ECH