Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00937 ATGGCAAAGGAAGAACTAGAACTTGCCTCCAATTCCTGTTCAGAACAAAACCCACCTTCTAAAATGGACGACAAACCAGGGAGCCTTGGAGCGTGCGTCCACGGCAGTGCTCTTCctgtcttctttgttttgttcggACGTATGATCGACTCTTTGGGAAATCTATCCAAGCATCCTCACAATTTGTCTTCACGGGTTTCCGAGCATGCTTTGTACTTGGTATATCTTGGTCTTGTCGTTCTGGTATCCGCCTGGATTGGAGTTGCGTTCTGGATGCAAACAGGAGAAAGGCAGACAGCTCGTCTGCGGTTAAAATATCTGCAGTCAGTTCTAAAAAAGgacattaatttctttgacaACGAAGCCAGAGAcgctaatataatttttcatatttccaGTGATGCTATATTGGTGCAAGATGCAATAGGTGACAAGATAGGACACACCATACGTTACCTTTCTCAATTCATTGTTGGATTTGCCATTGGATTCACATCAGTATGGCAGCTTACACTTCTCACCTTGGCTGTTGTTCCATTAATAGCTGTAGCAGGGGGAGCTTATACTATAATCATGTCTACCTTATCAGAAAAAGGTGAAGCTGCTTATGCGCAAGCAGGCAAGGTTGCAGAAGAGGTAATTTCTCAGGTACGTACTGTGTACTCATTTGtaggagaagagaaagcagTTGGTGAATATTCCAAGTCACTTGATAATGCTCTTAAGCTAGGCAAGAAGGGTGGTTTTGCAAAAGGAGTTGGTGTGGGATTTACATATGGGCTGTTGTTTTGTGCCTGGGCATTGCTTCTCTGGTATGCAAGCATTCTTGTGAGGCATCACAAGACAAATGGTGGGAAAGCATTCACCACAATCATTAATGTTATCTTTAGCGGATTTGCTCTGGGTCAAGCTGCTCCAAACCTTGGATCTATTGCGAAAGGGCGTGCAGCTGCTGCCAATATCATGAACATGATCGCTTCAGTTTCAGAATTCTCTGGAAGGTTGGAAGATGGGGAAGTTCTACCATTAGTATCAGGGAATATTGAATTTTGTGAGGTCTCCTTTTCTTACCCCTCAAGGTCCAATATGatctttgaaaatttgagCTTCTCAGTAAGCGCAGGGAAGACCATTGCAGTTGTTGGTCCCAGTGGTTCAGGAAAAAGCACAATCATTTCCTTGATCCAAAGATTCTATGATCCCACTTcagGTAAGATACTCTTGGAAGGGCACGATTTAAAGAGCCTTCAATTGAAATGGTTGAGGGAGCAATTGGGTTTGGTCAGTCAAGAACCAGCATTGTTTGCGTCAACAATATCAGGGAACATTTTATTTGGGAAAGAAGACGCTGAAATGGATCAAATCGTACAAGCCGCCAAAGCTGCAAATGCACATAATTTCATTCAAGGACTACCTGATGGTTATGAGACTCAGGTTGGGGAGGGAGGGACCCAACTCTCGGGTGGCCAAAAGCAGAGAATTGCTATAGCCAGGGCCGTGCTCAGAAATCCAAAGATATTACTTCTAGATGAGGCTACCAGTGCTCTTGATGCAGAATCAGAACTAGTTGTTCAACAAGCACTAGAAAAGATAATGTCTAACCGGACGACAATAATAGTTGCACACCGATTATCCACTGTTCGAGACGTTGATACAATCTTGGTCTTGAAGAACGGTCAAATTGTTGAAAGTGGGACTCATCTGGAACTGATGTCCCAAAATGGCGAATATGCCAATCTGGTGAGCTTGCAGTCATCAGAAAATGTAACAAGTTCTTGCATCTTATCTCGTTCTGGgagttcaaaaaattttagttttagagaagtttcagaaaatgaaaacaatgaaGAGGAGTTTAAGTCAATTACAACAAGAAACCTGGAACGAGGCTTCCCATCAAACTCTGCTTCATCTCCGTCAATTTTTGATCTATTGAGACTGAATGCACCGGAGTGGCCCCATGCAATACTAGGATCCATGGGTGCAATTATGGCTGGTATGGAAGCTCCTCTGTTTGCCCTTGGAATCACTCATATTTTGGCTGCATTTTATTCTCCTCATGGttctaaaatcaaacaagaagTTGATAAGGTAGCTCTTGTATTTGTTGGAGCGGGTGTTATTACAATACCTATTTATCTGCTGCAACACTATTTCTATACATTGATGGGAGAGCGTCTCACTGCCCGTGTACGCTTATTAATGTTCTCAGCTATTCTTACCAATGAAATTGCGTGGTTTGATTTGGATGAGAACAACACTGGGTCACTAACAGCTATGCTAGCTGCCGATGCAACATTAGTAAGAAGTGCTCTGGCTGATCGACTCTCAACAATTGTGCAAAATGTATCGCTCACAGTAACAGCATTTGTTATTGCCTTCACATTGAGTTGGAAACTAACAGCTGTGGTCGTAGCCTGTCTCCCTCTGCTTGTTGGAGCTTCAATCACAGAGCAACTTTTCCTCAAGGGATTTGGAGGAAACTACAGCCATGCCTACTCTAGAGCAACCTGTGTGGCACGTGAAGCCATTGCTAATATACGAACAGTTGCTGCTTTTGGGGCAGAAGATCGAATCTCAATCCAATTTGCCTCTGAATTGAACAAACCCAACAAGCAAGCACTTATACGAGGCCATATATCCGGTTTTGGATATGGTATAACTCAACTGTTTTCCTTTTGCTCCTATGCACTTGGGCTCTGGTATGCATCTGTTTTAATCAAGCAAAAAGAATCAAACTTTGGAGATATTATAAAGTCCTTCATGGTTTTAATTGTCACTGCTCTGGCAATAGCAGAAACACTAGCCCTTGCCCCAGATATTGTAAAGGGGTCACAAGCACTAGGGTCGGTTTTCAATATCCTGAGAAGAAAAACAGCAATCACTCCCAACGATCCCAAGTCGAAGATGGTAAGTAATGTCAAAGGAGAAGTAGAGTTCAAAGACGTGTGCTTCAGTTACCCAATGAGACCAGATGTGATCATCTTCCAGAACTTAAACCTCAAAATCTCAGCAGGGAAGAGTCTAGCAGTAGTAGGCCAAAGTGGATCCGGAAAGAGTACTGTGATTTCACTGGTAATAAGATTTTATGACCCCACTTCTGGGTTGGTTCTAATTGATGGATGTGATATCAAAAGCGTGAACTTGAGATCTTTAAGGTCGAAGATTGGTTTAGTTCAACAAGAACCTGCTTTGTTCTCTACAacaatatatgaaaacatCAAGTATGGTAATGAGGAGGCATCGGAGATTGAGATAATGAAAGCAGCGAAAGCAGCAAATGCTCATGAATTCATCAGCAGAATGCCTCAAGGGTACGAAACTGAGGTTGGTGAGAGAGGAGTGCAGTTATCAGGAGGACAGAAACAGAGGGTGGCAATTGCTAGAGCTATTCTCAAAGATCCATCAATTCTTCTGTTGGATGAGGCAACGAGTGCATTGGACACTGTATCAGAGAGGCTGGTTCAAGAGGCTCTTGATAAGCTAATGGAGAGCCGAACAACAATTTTGGTGGCTCACAGGTTATCAACTGTCCGCGATGCAGATTCCATTGCAGTGCTGCAAAATGGGAGGGTCGTTGAAATGGGTACTCACGATCGCCTCATTGCCAAACCAAATAGCATTTATAAGCAATTGGTTAGCTTACAACAAGAAGAAGCTTG 3662 0.4126 MAKEELELASNSCSEQNPPSKMDDKPGSLGACVHGSALPVFFVLFGRMIDSLGNLSKHPHNLSSRVSEHALYLVYLGLVVLVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKIGHTIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAQAGKVAEEVISQVRTVYSFVGEEKAVGEYSKSLDNALKLGKKGGFAKGVGVGFTYGLLFCAWALLLWYASILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLGSIAKGRAAAANIMNMIASVSEFSGRLEDGEVLPLVSGNIEFCEVSFSYPSRSNMIFENLSFSVSAGKTIAVVGPSGSGKSTIISLIQRFYDPTSGKILLEGHDLKSLQLKWLREQLGLVSQEPALFASTISGNILFGKEDAEMDQIVQAAKAANAHNFIQGLPDGYETQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELVVQQALEKIMSNRTTIIVAHRLSTVRDVDTILVLKNGQIVESGTHLELMSQNGEYANLVSLQSSENVTSSCILSRSGSSKNFSFREVSENENNEEEFKSITTRNLERGFPSNSASSPSIFDLLRLNAPEWPHAILGSMGAIMAGMEAPLFALGITHILAAFYSPHGSKIKQEVDKVALVFVGAGVITIPIYLLQHYFYTLMGERLTARVRLLMFSAILTNEIAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVSLTVTAFVIAFTLSWKLTAVVVACLPLLVGASITEQLFLKGFGGNYSHAYSRATCVAREAIANIRTVAAFGAEDRISIQFASELNKPNKQALIRGHISGFGYGITQLFSFCSYALGLWYASVLIKQKESNFGDIIKSFMVLIVTALAIAETLALAPDIVKGSQALGSVFNILRRKTAITPNDPKSKMVSNVKGEVEFKDVCFSYPMRPDVIIFQNLNLKISAGKSLAVVGQSGSGKSTVISLVIRFYDPTSGLVLIDGCDIKSVNLRSLRSKIGLVQQEPALFSTTIYENIKYGNEEASEIEIMKAAKAANAHEFISRMPQGYETEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMESRTTILVAHRLSTVRDADSIAVLQNGRVVEMGTHDRLIAKPNSIYKQLVSLQQEEA 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00937 1220 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 20 449 - -
Bva10g00937 1220 Gene3D - 968 1220 IPR027417 -
Bva10g00937 1220 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 20 449 IPR039421 -
Bva10g00937 1220 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 27 313 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva10g00937 1220 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 348 583 IPR003439 GO:0005524
Bva10g00937 1220 MobiDBLite consensus disorder prediction 1 26 - -
Bva10g00937 1220 ProSitePatterns ABC transporters family signature. 486 500 IPR017871 GO:0005524
Bva10g00937 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 584 IPR027417 -
Bva10g00937 1220 CDD ABC_MTABC3_MDL1_MDL2 348 584 - -
Bva10g00937 1220 SUPERFAMILY ABC transporter transmembrane region 644 957 IPR036640 GO:0005524|GO:0016021
Bva10g00937 1220 Pfam ABC transporter 997 1145 IPR003439 GO:0005524
Bva10g00937 1220 Pfam ABC transporter transmembrane region 660 929 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva10g00937 1220 Pfam ABC transporter transmembrane region 31 297 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva10g00937 1220 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 656 943 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva10g00937 1220 SUPERFAMILY ABC transporter transmembrane region 29 321 IPR036640 GO:0005524|GO:0016021
Bva10g00937 1220 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 526 1216 - -
Bva10g00937 1220 Pfam ABC transporter 366 514 IPR003439 GO:0005524
Bva10g00937 1220 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 526 1216 IPR039421 -
Bva10g00937 1220 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 454 545 - -
Bva10g00937 1220 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 454 545 IPR039421 -
Bva10g00937 1220 SMART AAA_5 1005 1191 IPR003593 -
Bva10g00937 1220 SMART AAA_5 374 560 IPR003593 -
Bva10g00937 1220 CDD ABC_MTABC3_MDL1_MDL2 978 1216 - -
Bva10g00937 1220 Gene3D ABC transporter type 1, transmembrane domain 27 947 IPR036640 GO:0005524|GO:0016021
Bva10g00937 1220 Gene3D - 338 585 IPR027417 -
Bva10g00937 1220 CDD ABC_6TM_Pgp_ABCB1_D1_like 26 321 - -
Bva10g00937 1220 ProSitePatterns ABC transporters family signature. 1117 1131 IPR017871 GO:0005524
Bva10g00937 1220 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 978 1214 IPR003439 GO:0005524
Bva10g00937 1220 CDD ABC_6TM_Pgp_ABCB1_D2_like 645 961 - -
Bva10g00937 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 968 1216 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00937 Bva-Chr10 7023422 7028071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00937 27 1217 Calmodulin-binding Proteins AT2G36910 49.550 0.0 1181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00937 K05658 - gmx:100787093 1975.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00937 10 7023422 7028071 Bva10g00937 10 7023422 7028071 ECH