Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva10g00937 | ATGGCAAAGGAAGAACTAGAACTTGCCTCCAATTCCTGTTCAGAACAAAACCCACCTTCTAAAATGGACGACAAACCAGGGAGCCTTGGAGCGTGCGTCCACGGCAGTGCTCTTCctgtcttctttgttttgttcggACGTATGATCGACTCTTTGGGAAATCTATCCAAGCATCCTCACAATTTGTCTTCACGGGTTTCCGAGCATGCTTTGTACTTGGTATATCTTGGTCTTGTCGTTCTGGTATCCGCCTGGATTGGAGTTGCGTTCTGGATGCAAACAGGAGAAAGGCAGACAGCTCGTCTGCGGTTAAAATATCTGCAGTCAGTTCTAAAAAAGgacattaatttctttgacaACGAAGCCAGAGAcgctaatataatttttcatatttccaGTGATGCTATATTGGTGCAAGATGCAATAGGTGACAAGATAGGACACACCATACGTTACCTTTCTCAATTCATTGTTGGATTTGCCATTGGATTCACATCAGTATGGCAGCTTACACTTCTCACCTTGGCTGTTGTTCCATTAATAGCTGTAGCAGGGGGAGCTTATACTATAATCATGTCTACCTTATCAGAAAAAGGTGAAGCTGCTTATGCGCAAGCAGGCAAGGTTGCAGAAGAGGTAATTTCTCAGGTACGTACTGTGTACTCATTTGtaggagaagagaaagcagTTGGTGAATATTCCAAGTCACTTGATAATGCTCTTAAGCTAGGCAAGAAGGGTGGTTTTGCAAAAGGAGTTGGTGTGGGATTTACATATGGGCTGTTGTTTTGTGCCTGGGCATTGCTTCTCTGGTATGCAAGCATTCTTGTGAGGCATCACAAGACAAATGGTGGGAAAGCATTCACCACAATCATTAATGTTATCTTTAGCGGATTTGCTCTGGGTCAAGCTGCTCCAAACCTTGGATCTATTGCGAAAGGGCGTGCAGCTGCTGCCAATATCATGAACATGATCGCTTCAGTTTCAGAATTCTCTGGAAGGTTGGAAGATGGGGAAGTTCTACCATTAGTATCAGGGAATATTGAATTTTGTGAGGTCTCCTTTTCTTACCCCTCAAGGTCCAATATGatctttgaaaatttgagCTTCTCAGTAAGCGCAGGGAAGACCATTGCAGTTGTTGGTCCCAGTGGTTCAGGAAAAAGCACAATCATTTCCTTGATCCAAAGATTCTATGATCCCACTTcagGTAAGATACTCTTGGAAGGGCACGATTTAAAGAGCCTTCAATTGAAATGGTTGAGGGAGCAATTGGGTTTGGTCAGTCAAGAACCAGCATTGTTTGCGTCAACAATATCAGGGAACATTTTATTTGGGAAAGAAGACGCTGAAATGGATCAAATCGTACAAGCCGCCAAAGCTGCAAATGCACATAATTTCATTCAAGGACTACCTGATGGTTATGAGACTCAGGTTGGGGAGGGAGGGACCCAACTCTCGGGTGGCCAAAAGCAGAGAATTGCTATAGCCAGGGCCGTGCTCAGAAATCCAAAGATATTACTTCTAGATGAGGCTACCAGTGCTCTTGATGCAGAATCAGAACTAGTTGTTCAACAAGCACTAGAAAAGATAATGTCTAACCGGACGACAATAATAGTTGCACACCGATTATCCACTGTTCGAGACGTTGATACAATCTTGGTCTTGAAGAACGGTCAAATTGTTGAAAGTGGGACTCATCTGGAACTGATGTCCCAAAATGGCGAATATGCCAATCTGGTGAGCTTGCAGTCATCAGAAAATGTAACAAGTTCTTGCATCTTATCTCGTTCTGGgagttcaaaaaattttagttttagagaagtttcagaaaatgaaaacaatgaaGAGGAGTTTAAGTCAATTACAACAAGAAACCTGGAACGAGGCTTCCCATCAAACTCTGCTTCATCTCCGTCAATTTTTGATCTATTGAGACTGAATGCACCGGAGTGGCCCCATGCAATACTAGGATCCATGGGTGCAATTATGGCTGGTATGGAAGCTCCTCTGTTTGCCCTTGGAATCACTCATATTTTGGCTGCATTTTATTCTCCTCATGGttctaaaatcaaacaagaagTTGATAAGGTAGCTCTTGTATTTGTTGGAGCGGGTGTTATTACAATACCTATTTATCTGCTGCAACACTATTTCTATACATTGATGGGAGAGCGTCTCACTGCCCGTGTACGCTTATTAATGTTCTCAGCTATTCTTACCAATGAAATTGCGTGGTTTGATTTGGATGAGAACAACACTGGGTCACTAACAGCTATGCTAGCTGCCGATGCAACATTAGTAAGAAGTGCTCTGGCTGATCGACTCTCAACAATTGTGCAAAATGTATCGCTCACAGTAACAGCATTTGTTATTGCCTTCACATTGAGTTGGAAACTAACAGCTGTGGTCGTAGCCTGTCTCCCTCTGCTTGTTGGAGCTTCAATCACAGAGCAACTTTTCCTCAAGGGATTTGGAGGAAACTACAGCCATGCCTACTCTAGAGCAACCTGTGTGGCACGTGAAGCCATTGCTAATATACGAACAGTTGCTGCTTTTGGGGCAGAAGATCGAATCTCAATCCAATTTGCCTCTGAATTGAACAAACCCAACAAGCAAGCACTTATACGAGGCCATATATCCGGTTTTGGATATGGTATAACTCAACTGTTTTCCTTTTGCTCCTATGCACTTGGGCTCTGGTATGCATCTGTTTTAATCAAGCAAAAAGAATCAAACTTTGGAGATATTATAAAGTCCTTCATGGTTTTAATTGTCACTGCTCTGGCAATAGCAGAAACACTAGCCCTTGCCCCAGATATTGTAAAGGGGTCACAAGCACTAGGGTCGGTTTTCAATATCCTGAGAAGAAAAACAGCAATCACTCCCAACGATCCCAAGTCGAAGATGGTAAGTAATGTCAAAGGAGAAGTAGAGTTCAAAGACGTGTGCTTCAGTTACCCAATGAGACCAGATGTGATCATCTTCCAGAACTTAAACCTCAAAATCTCAGCAGGGAAGAGTCTAGCAGTAGTAGGCCAAAGTGGATCCGGAAAGAGTACTGTGATTTCACTGGTAATAAGATTTTATGACCCCACTTCTGGGTTGGTTCTAATTGATGGATGTGATATCAAAAGCGTGAACTTGAGATCTTTAAGGTCGAAGATTGGTTTAGTTCAACAAGAACCTGCTTTGTTCTCTACAacaatatatgaaaacatCAAGTATGGTAATGAGGAGGCATCGGAGATTGAGATAATGAAAGCAGCGAAAGCAGCAAATGCTCATGAATTCATCAGCAGAATGCCTCAAGGGTACGAAACTGAGGTTGGTGAGAGAGGAGTGCAGTTATCAGGAGGACAGAAACAGAGGGTGGCAATTGCTAGAGCTATTCTCAAAGATCCATCAATTCTTCTGTTGGATGAGGCAACGAGTGCATTGGACACTGTATCAGAGAGGCTGGTTCAAGAGGCTCTTGATAAGCTAATGGAGAGCCGAACAACAATTTTGGTGGCTCACAGGTTATCAACTGTCCGCGATGCAGATTCCATTGCAGTGCTGCAAAATGGGAGGGTCGTTGAAATGGGTACTCACGATCGCCTCATTGCCAAACCAAATAGCATTTATAAGCAATTGGTTAGCTTACAACAAGAAGAAGCTTG | 3662 | 0.4126 | MAKEELELASNSCSEQNPPSKMDDKPGSLGACVHGSALPVFFVLFGRMIDSLGNLSKHPHNLSSRVSEHALYLVYLGLVVLVSAWIGVAFWMQTGERQTARLRLKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKIGHTIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTIIMSTLSEKGEAAYAQAGKVAEEVISQVRTVYSFVGEEKAVGEYSKSLDNALKLGKKGGFAKGVGVGFTYGLLFCAWALLLWYASILVRHHKTNGGKAFTTIINVIFSGFALGQAAPNLGSIAKGRAAAANIMNMIASVSEFSGRLEDGEVLPLVSGNIEFCEVSFSYPSRSNMIFENLSFSVSAGKTIAVVGPSGSGKSTIISLIQRFYDPTSGKILLEGHDLKSLQLKWLREQLGLVSQEPALFASTISGNILFGKEDAEMDQIVQAAKAANAHNFIQGLPDGYETQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELVVQQALEKIMSNRTTIIVAHRLSTVRDVDTILVLKNGQIVESGTHLELMSQNGEYANLVSLQSSENVTSSCILSRSGSSKNFSFREVSENENNEEEFKSITTRNLERGFPSNSASSPSIFDLLRLNAPEWPHAILGSMGAIMAGMEAPLFALGITHILAAFYSPHGSKIKQEVDKVALVFVGAGVITIPIYLLQHYFYTLMGERLTARVRLLMFSAILTNEIAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVSLTVTAFVIAFTLSWKLTAVVVACLPLLVGASITEQLFLKGFGGNYSHAYSRATCVAREAIANIRTVAAFGAEDRISIQFASELNKPNKQALIRGHISGFGYGITQLFSFCSYALGLWYASVLIKQKESNFGDIIKSFMVLIVTALAIAETLALAPDIVKGSQALGSVFNILRRKTAITPNDPKSKMVSNVKGEVEFKDVCFSYPMRPDVIIFQNLNLKISAGKSLAVVGQSGSGKSTVISLVIRFYDPTSGLVLIDGCDIKSVNLRSLRSKIGLVQQEPALFSTTIYENIKYGNEEASEIEIMKAAKAANAHEFISRMPQGYETEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMESRTTILVAHRLSTVRDADSIAVLQNGRVVEMGTHDRLIAKPNSIYKQLVSLQQEEA | 1220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva10g00937 | 1220 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 13-RELATED | 20 | 449 | - | - | |
Bva10g00937 | 1220 | Gene3D | - | 968 | 1220 | IPR027417 | - | |
Bva10g00937 | 1220 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 20 | 449 | IPR039421 | - | |
Bva10g00937 | 1220 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 27 | 313 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva10g00937 | 1220 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 348 | 583 | IPR003439 | GO:0005524 | |
Bva10g00937 | 1220 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Bva10g00937 | 1220 | ProSitePatterns | ABC transporters family signature. | 486 | 500 | IPR017871 | GO:0005524 | |
Bva10g00937 | 1220 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 339 | 584 | IPR027417 | - | |
Bva10g00937 | 1220 | CDD | ABC_MTABC3_MDL1_MDL2 | 348 | 584 | - | - | |
Bva10g00937 | 1220 | SUPERFAMILY | ABC transporter transmembrane region | 644 | 957 | IPR036640 | GO:0005524|GO:0016021 | |
Bva10g00937 | 1220 | Pfam | ABC transporter | 997 | 1145 | IPR003439 | GO:0005524 | |
Bva10g00937 | 1220 | Pfam | ABC transporter transmembrane region | 660 | 929 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva10g00937 | 1220 | Pfam | ABC transporter transmembrane region | 31 | 297 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva10g00937 | 1220 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 656 | 943 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Bva10g00937 | 1220 | SUPERFAMILY | ABC transporter transmembrane region | 29 | 321 | IPR036640 | GO:0005524|GO:0016021 | |
Bva10g00937 | 1220 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 13-RELATED | 526 | 1216 | - | - | |
Bva10g00937 | 1220 | Pfam | ABC transporter | 366 | 514 | IPR003439 | GO:0005524 | |
Bva10g00937 | 1220 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 526 | 1216 | IPR039421 | - | |
Bva10g00937 | 1220 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 13-RELATED | 454 | 545 | - | - | |
Bva10g00937 | 1220 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY B | 454 | 545 | IPR039421 | - | |
Bva10g00937 | 1220 | SMART | AAA_5 | 1005 | 1191 | IPR003593 | - | |
Bva10g00937 | 1220 | SMART | AAA_5 | 374 | 560 | IPR003593 | - | |
Bva10g00937 | 1220 | CDD | ABC_MTABC3_MDL1_MDL2 | 978 | 1216 | - | - | |
Bva10g00937 | 1220 | Gene3D | ABC transporter type 1, transmembrane domain | 27 | 947 | IPR036640 | GO:0005524|GO:0016021 | |
Bva10g00937 | 1220 | Gene3D | - | 338 | 585 | IPR027417 | - | |
Bva10g00937 | 1220 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 26 | 321 | - | - | |
Bva10g00937 | 1220 | ProSitePatterns | ABC transporters family signature. | 1117 | 1131 | IPR017871 | GO:0005524 | |
Bva10g00937 | 1220 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 978 | 1214 | IPR003439 | GO:0005524 | |
Bva10g00937 | 1220 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 645 | 961 | - | - | |
Bva10g00937 | 1220 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 968 | 1216 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva10g00937 | Bva-Chr10 | 7023422 | 7028071 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva10g00937 | 27 | 1217 | Calmodulin-binding Proteins | AT2G36910 | 49.550 | 0.0 | 1181 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva10g00937 | K05658 | - | gmx:100787093 | 1975.67 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva10g00937 | 10 | 7023422 | 7028071 | Bva10g00937 | 10 | 7023422 | 7028071 | ECH |