Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00934 ATGACAACTGCTTTCGGCTGTTTATATGTTCTTCTGTGGCTGCACTTAACCATTTGCACCAGCACCAGCACCACTTACAGTGACCTTGATGCACTGCTGAAGGTGAAGGCTGCCATGAAGAGTTCCAAAGCCAAGGGTCCAGCGCTTGAGGATTGGAAATACTCTTCTTCTCCATCTGCTCATTGTTCTTTCTCTGGAGTAACATGTGACAACAACTCGCGAGTGATTCATCTTAATGTGTCGCTCACTCCCATGTTTGGCCACCTTCCGTCGGAGATTGGACTGTTGGACAAACTGGTTAACCTCACCATCAGCCAGAACAATCTCACTGGTCATCTTCCCAAGGAGTTAGCCAACCTCATTTCTCTCAAGTACTTCAACATCTCGCACAACGCCTTCAACGGCACTTTCCCTGGAGAAATTACTCTTGGCATGACAGAACTTGAGGTTCTTGATGCCTACGACAACAATTTCACGGGACCGCTTCCTCTAGCGTTGGTGAAGCTCAAGAATCTCAGACGCCTTCATCTTGCTGGCAGCTACTTTTATGGGGAGATACCGGAGATTTATTCAGAAATTCAAAGCTTGGAGATTTTACACCTGAACGAAAACGAACTCGGAGGACATATTCCAGCGAGTTTGGCTCGATTGAAAAATctcaaagaattatatattggGTACAATAACAAATACAAGGGAGGAATCCCGCCCGAGTTTGGCTCAATGGAGTCGATTCAACTCATAGACATGGCTGAATGTGGCCTAACCGGAGAGATTCCGCCGAGCCTGAGCTCTCTGAAGAACATGCATTCCTTGTTTCTACAATCGAACAATCTTACAGGAACCATTCCTCCTGAATTCTCTTCTTTGATTAGCCTCAAATCGTTGGATCTCGCCTTCAACGAACTAACTGGTGAGATTCCACTAAGCTTCTCCAACCTCAAAAATATCACCCTATTCCATTTCTTTCATAATAAGCTTGAGGGCCCCATCCCAGCCTTCATTGGTGATCTTCCAAATCTGGAAGTGCTTCAGCTTTGGGGTAACAATTTTACCCTCCAATTGCCAGAAAATCTCGGTAGAAATGGAAAACTCAAGAAACTGGACGTTTCCATCAATCATCTCACCGGACCGATTCCTCGGGACTTGTGCAAAGGAGGAAAGTTGGAGGATTTTATTCTGATGCAAAACTTCTTCTACGGCCCAATTCCCGACGAGATTGGTAACTGCAAGTCTCTCAAAAAGAATAGGCTTGTTGGCGAAATTCCAAAGGGTATTAAGAATATGGTAGACCTGAGCATTCTGAACCTCTCTCGGAACGACATGACAGGCCAAGTTCCAGATGAGATTCGATTCATGACGAGCCTCACTACCCTTGATCTCTCCAATAACAATTTCGTGGGTATACTTCCCACAGGCGGGCAATTCATCGTCTTCAACGACAGGTCGTTTTCCGGGAATCCCGATCTATGCTTACCACGCCATCAATATTGCCCACCTTCGGTGTACGCAGATGAGGAAAGGGGTAGAAGACATAGGCCCTTTGGTTCAAAATCTACCAAAGTCATTGCTATAGCAATTGCACTGGCTACTGCAATGTTATTGGTGCTggttacaatatatataatgagaaaacaaaagcacAGGAGTTCCATGGCTTGGAAGCTCACAGCATTCCAACGGCTTGAGTTCAAAGCTGAAGACGTGCTGGAGTGCTTGAAGGAGGAGAACATAATAGGGAAGGGGGGTGCAGGGATAGTGTACCGTGGGTCCATGCCAGACGGTATTGACGTGGCAATCAAACGATTGGTTGGCCAAGGTAGTGGACGAAACGACTACGGATTCAAGGCTGAAATCCAGACACTTGGGCGGATCAGACACCGAAACATCGTCCGGCTACTCGGGGATGTCAAATCCAATAACATATTGCTCGATGCCGACTTTGAGGCCCATGTTGCTGATTTTGGACTCGCAAAGTTCTTGCAAGACCCTGGAGCCTCTCAGTCCATGTCCTCCATTGCTGGCTCCTACGGTTACATCGCACCAGAATATGCTTACACCTTGAAAGTGGACGAGAAAAGTGATGTATATAGTTTTGGCGTGGTGTTGTTGGAGCTGATAGTTGGAAGAAAACCAGTGGGTGAGTTCGGCGATGGAGTGGACATCGTTGGTTGGATGAAGAAAACCATATCAGAACTGTCTCAGCCATCTGATGCAGCATCAGTGCTGGCAGTGTTGGACCCCAGGCTAAGTGGTTACCCATTAACAAGCGTGATTCATATGTTCAAAGTAGCCATATTGTGCGTTGAAGAAGAAGGATCTGCTAGGCCCACCATGAGGGAAGTTGTTCATATGTTGACCAACTCTCCTCAGTCTTCTCCGGACCTAATCAATCTCTA 2399 0.4577 MTTAFGCLYVLLWLHLTICTSTSTTYSDLDALLKVKAAMKSSKAKGPALEDWKYSSSPSAHCSFSGVTCDNNSRVIHLNVSLTPMFGHLPSEIGLLDKLVNLTISQNNLTGHLPKELANLISLKYFNISHNAFNGTFPGEITLGMTELEVLDAYDNNFTGPLPLALVKLKNLRRLHLAGSYFYGEIPEIYSEIQSLEILHLNENELGGHIPASLARLKNLKELYIGYNNKYKGGIPPEFGSMESIQLIDMAECGLTGEIPPSLSSLKNMHSLFLQSNNLTGTIPPEFSSLISLKSLDLAFNELTGEIPLSFSNLKNITLFHFFHNKLEGPIPAFIGDLPNLEVLQLWGNNFTLQLPENLGRNGKLKKLDVSINHLTGPIPRDLCKGGKLEDFILMQNFFYGPIPDEIGNCKSLKKNRLVGEIPKGIKNMVDLSILNLSRNDMTGQVPDEIRFMTSLTTLDLSNNNFVGILPTGGQFIVFNDRSFSGNPDLCLPRHQYCPPSVYADEERGRRHRPFGSKSTKVIAIAIALATAMLLVLVTIYIMRKQKHRSSMAWKLTAFQRLEFKAEDVLECLKEENIIGKGGAGIVYRGSMPDGIDVAIKRLVGQGSGRNDYGFKAEIQTLGRIRHRNIVRLLGDVKSNNILLDADFEAHVADFGLAKFLQDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWMKKTISELSQPSDAASVLAVLDPRLSGYPLTSVIHMFKVAILCVEEEGSARPTMREVVHMLTNSPQSSPDLINL 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00934 799 SUPERFAMILY L domain-like 61 309 - -
Bva10g00934 799 Pfam Protein kinase domain 636 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00934 799 SMART LRR_typ_2 453 476 IPR003591 -
Bva10g00934 799 SMART LRR_typ_2 266 289 IPR003591 -
Bva10g00934 799 SMART LRR_typ_2 290 313 IPR003591 -
Bva10g00934 799 SMART LRR_typ_2 338 362 IPR003591 -
Bva10g00934 799 SMART LRR_typ_2 193 217 IPR003591 -
Bva10g00934 799 Gene3D Ribonuclease Inhibitor 27 142 IPR032675 -
Bva10g00934 799 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 414 635 - -
Bva10g00934 799 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 7 417 - -
Bva10g00934 799 SUPERFAMILY L domain-like 229 497 - -
Bva10g00934 799 Gene3D Ribonuclease Inhibitor 143 230 IPR032675 -
Bva10g00934 799 Gene3D Ribonuclease Inhibitor 231 504 IPR032675 -
Bva10g00934 799 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Bva10g00934 799 Gene3D Transferase(Phosphotransferase) domain 1 640 796 - -
Bva10g00934 799 PANTHER UNNAMED PRODUCT 7 417 - -
Bva10g00934 799 PANTHER UNNAMED PRODUCT 636 793 - -
Bva10g00934 799 ProSiteProfiles Protein kinase domain profile. 464 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00934 799 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 636 793 - -
Bva10g00934 799 SUPERFAMILY Protein kinase-like (PK-like) 555 786 IPR011009 -
Bva10g00934 799 Pfam Leucine Rich Repeat 292 314 IPR001611 GO:0005515
Bva10g00934 799 PANTHER UNNAMED PRODUCT 414 635 - -
Bva10g00934 799 SMART serkin_6 573 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00934 799 Gene3D Phosphorylase Kinase; domain 1 538 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00934 Bva-Chr10 7007332 7010824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00934 26 797 Receptor kinase-like Gene Family AT1G75820 45.010 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva10g00934 Pkinase 5.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00934 K00924 - pvy:116141866 558.91