Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00926 ATGCCAAACCCAAGGGTCTTCTTTGACATCTCCATCGGCGGATCGCCCGCCGGTCGTATCGTCATGGAACTCTTCGCTGATACCACTCCTCGTACGGCGGAGAATTTCCGAGCCCTCTGCACAGGCGAGAAGGGGATCGGTCGCAGTGGGAAGCCTCTGCACTACAAGGGGTCGTGTTTCCATCGAGTGATTCCCGGCTTTATGTGCCAGGGTGGGGATTTCACGGCCGGTAACGGAACTGGTGGAGAATCGATCTATGGATCGAAGTTCGCAGACgaaaatttcattaagaaGCACACAGGCCCTGGAATTTTGTCAATGGCGAACTCGGGCCCTGGAACGAATGGATCTCAGTTCTTCATTTGTACGGAGAAGACGGAGTGGCTGGACGGAAAGCATGTGGTGTTTGGGCAAGTGGTGGAGGGGATGAACGTGGTGAAGGCGATTGAGAAGGTTGGGTCTTCCTCTGGGAGGACCTCCAAGCCCGTCGTCATCGCCGACTGTGGCTA 509 0.5462 MPNPRVFFDISIGGSPAGRIVMELFADTTPRTAENFRALCTGEKGIGRSGKPLHYKGSCFHRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANSGPGTNGSQFFICTEKTEWLDGKHVVFGQVVEGMNVVKAIEKVGSSSGRTSKPVVIADCG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00926 169 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 169 IPR002130 GO:0000413|GO:0003755
Bva10g00926 169 Gene3D - 1 169 IPR029000 -
Bva10g00926 169 PIRSF Peptidylpro_ismrse 1 169 IPR024936 GO:0003755
Bva10g00926 169 CDD cyclophilin_ABH_like 4 169 - -
Bva10g00926 169 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 IPR002130 GO:0000413|GO:0003755
Bva10g00926 169 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Bva10g00926 169 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Bva10g00926 169 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 IPR002130 GO:0000413|GO:0003755
Bva10g00926 169 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Bva10g00926 169 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 169 IPR002130 GO:0000413|GO:0003755
Bva10g00926 169 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 IPR020892 GO:0003755|GO:0006457
Bva10g00926 169 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 169 - -
Bva10g00926 169 SUPERFAMILY Cyclophilin-like 2 169 IPR029000 -
Bva10g00926 169 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00926 Bva-Chr10 6957359 6958019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00926 18 152 U-box Gene Family AT5G67530 49.265 5.44e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00926 K01802 - cit:102623101 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00926 10 6957359 6958019 Bva10g00926 10 6957359 6958019 ECH