Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00902 ATGGctttaagaaaatcaaacaaacttGCTCAAACAGCAGTTCTTAAGCAAATTCTCAAGAGATGCTCAAGTTTAGGAAAGAAGCAAGGGTACGATGATCAAGGCCTCCCTTTGGACGTACCCAAGGGTCATTTTGTTGTATATGTTGGAGAAAATAGGAGTAGATACATTGTGCCAATCTCTTTTCTGAGTCGCCCAGAGTTCCAAAACCTGCTCCAACAAGCAGAAGAAGAGTTTGGCTTTGATCACGAAAGGGGTCTCACTATTCCTTGTGAACAAGTTGTTTTTGAGTCTCTCACATCCATGCTCAGATA 314 0.3981 MALRKSNKLAQTAVLKQILKRCSSLGKKQGYDDQGLPLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQNLLQQAEEEFGFDHERGLTIPCEQVVFESLTSMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00902 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Bva10g00902 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Bva10g00902 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00902 Bva-Chr10 6858357 6859062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00902 1 99 Calmodulin-binding Proteins AT3G43120 41.584 6.37e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00902 K14488 - vvi:100247221 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00902 10 6858357 6859062 Bva08g00842 08 4327466 4327892 ECH
Bva10g00902 10 6858357 6859062 Bva10g00902 10 6858357 6859062 ECH