Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00894 atgcgTGGATTGCACAAATCAAAAACAGTTTCATGGGCCTCAGATATTGATCTTTGTCaggttaaattattcttatcaGAGGAATCTCCTTCTCAAGTGGGGTTCAATGCTCAAGACCACCTCCAAGCGAAGACATCATTGCCGTTGCATTCAGGCGGAGCAGGCTCTGATGACATTCTACCTCCTGGATTTGAGAGAAATCTTTCTTCAAATCATTTGCAGATTAAGCCATCCCAAATTCCTGTGATTAGATGGACTAATCCACCTAAGATTGTGTTGAATCTCTCATGGCAAGTTGTGGCTGGGGAGGAAAGCGAGGAGGTAGAGGATGAAAATCAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGCCCATCTTCCATTCCTCCCAACCCCTCTGTCTCAACGGATGTAGAAAACTCCCATTGCACTGATGGTCAAGCACCTTCAATACCAATTACACCCATCGAAGAGGAAGATGCAGCACTAGATGCATCGTCTGATTTTATGGCATCAGCTGATGTTCCACTAAGTTCGCAGCCTTCTCCATTAGCTCCCGGCATACCTGATTCAAAATCCACCGCAAGTGTGCAGTTAGCCCGTGGTGTAGAAACTGATATAGCTTCTACATCTTTAGCTTTAACTAATATCATAAAGAGCAATGAACATGGAAACTTTATTGACCATGAATTgctaaataaaattctcagcAACTCAGAAGTAATTGAGAAGTTAGTTGAAGATTATGGAGCATCTGATAGCTTGCAATATGTACCAAATGCGAGGTCAGCTTCAGTGGCTTTTTCACATCCACCTGTTCCTGTTTATCAAGCAGAAACCAGTGCACCTTTATCAGCTGCTTTTTCAGCCAGTCCTTCCTATCCTCAGCCAACATGGGGTCCAGGGGGGTCTATTCCTACACAATGGCTTCCTCCACCTGCCGTAAGTCCAGCAAAGGATGTGAACTACTACAAGAGCTTAATTCAGCAACATGGAGGGGAAAGGCAAGAGAATCTTCCACACCTCAATAACCGTAACATCCAGCAACCAGTAGCAAACCAGGAAACAACACAAAATTCTAGATCAAGGGAGTCGAAACCGAAGATAATGAAACCTTGTATCTATTTCAACAGTTCCAGAGGATGTCGAAATGGAGCTAACTGTGCATACCAGCATGATGTGGCATTCCAGCCAAGGGGTAGTCCTGTGCCCGGCATGCAAGATtcaaagagaatgaaaatggaTAGTGAGATTAGCAGTTA 1265 0.4229 MRGLHKSKTVSWASDIDLCQVKLFLSEESPSQVGFNAQDHLQAKTSLPLHSGGAGSDDILPPGFERNLSSNHLQIKPSQIPVIRWTNPPKIVLNLSWQVVAGEESEEVEDENQREMRVLEAIYPRPSSIPPNPSVSTDVENSHCTDGQAPSIPITPIEEEDAALDASSDFMASADVPLSSQPSPLAPGIPDSKSTASVQLARGVETDIASTSLALTNIIKSNEHGNFIDHELLNKILSNSEVIEKLVEDYGASDSLQYVPNARSASVAFSHPPVPVYQAETSAPLSAAFSASPSYPQPTWGPGGSIPTQWLPPPAVSPAKDVNYYKSLIQQHGGERQENLPHLNNRNIQQPVANQETTQNSRSRESKPKIMKPCIYFNSSRGCRNGANCAYQHDVAFQPRGSPVPGMQDSKRMKMDSEISS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00894 421 MobiDBLite consensus disorder prediction 333 361 - -
Bva10g00894 421 MobiDBLite consensus disorder prediction 397 421 - -
Bva10g00894 421 ProSiteProfiles Zinc finger C3H1-type profile. 368 396 IPR000571 GO:0046872
Bva10g00894 421 MobiDBLite consensus disorder prediction 124 145 - -
Bva10g00894 421 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 416 - -
Bva10g00894 421 MobiDBLite consensus disorder prediction 333 367 - -
Bva10g00894 421 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00894 Bva-Chr10 6801394 6806185 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bva10g00894 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00894 - - adu:107460053 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00894 10 6801394 6806185 Bva10g00894 10 6801394 6806185 ECH