Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00893 ATGGGAAAATCTACCTCCTGCTTCAAATTAATCACATGCGGTGGTGATGTGGTGGACAAAGATGATTACCAAGCATCTGAGATCAAAGATTCTCATGACAAACGAGGTTGGAGTTTCCGGAAGAGATCTGCAAGGCATCGTGTACTTAGCAATACTGTTATAACAGATACCTCTTCTTCTGCAAATAAGGAGAGTTCTGAATGTGCTAGTGTTAATTTTCAACAACCAGAAAACTCTAATGTTGTTGAGAAGATTTGCACAGCACATCGTTCTGATGAAAAACCTGATAAACCCCAGTTTTCCTCTGTGGTGGACTCACAAATATATGAGCCTGTTGCTGTCACTGAAACTGAAAGTAAGGCAGATGTTGATCCAGTTGCTGTCACTGAAATTGAAAGTAAGGCAGATGCCGATCCGCCAGAGTCAGTTGTTATCATTATCCAGTGTGCCGTCAGAGGGTTCTTGGCTCAGAGAGACCTGGTAAAGCTTAAGAATGTAGTGAAGTTGCAAGCTGCTGTTCGTGGTCACTTAGTTCGGAGGCATGCTGTAGGGACCCTACGTTGTATTCAAGCTATTGTTAAAATGCAGCTCCTTGTGCGAGCCCGCCATGCTCAGAAACTACATCCAGAAAAGCATTTAAATCAGAAGCAAAGCAAAAATGATGGCTTAAAAACATTGGGGAACGAAAATCACATGACCAAATCAAATGTGACATACACTTCCATTGAGAAGCTACTTAGCAATAGCTTTGCTTGTCAGCTGTTGGAATCCACAGCAAGAAACAAATCTATCCATGTCAAATGTGACCCTTCCAAAGCTGATTCAGCTTGGAAATGGTTGGAGAGATGGATGTCTGTTTCATCAACTGATACTAGAGAATTGAAAAAAGCATGTTCTGTGACAGAGCAATTGGATGATAGCAAAGAGAGCAGTTCTGTATCTCAATTGGAATCAGCTATTCGATCTGAAGATTTTAGTGAATCAGTTGATCCAAAGCCTATTGTTGGGGACCCAGTTTTGCCTTCTGAAGATAAAGAGAAGTTGATGACTTATGATGTTGATAACTTCAATTTTCATGGAAGCCATTGTGCATCTTCTATTGATGAAGATAACTTGGAGCAGGCTTTGCCTGAATTGACAGTTACATCCGATGTTAAAGTAACTTCTGTAGAAGTTGATCCTTACCAAAATGCAAAACTACCTTCAGATGCAATTGCTCCAAAGGATCTTGATTCTCTTCCACAGAGTACATCTGATGTTAACGTAATTTCTGTGGAAATTGATCCTCACCAAAATGCAAACCTGCCTTCAGATGCAAGTGCTCCAAAGGATCTTGATTCTTTTCCACAGATTACATCTGATGTTAATGTTACTTCTGTAGAAATTAATCCTTACCAAAATGCAAAACTGCCTTCAGATGCAAGTGCTCCAAAGGATCTTGATTCTCTTCCACAGATTACATCTGATGTTAAAATAACTTCTGGAGAAATTGATCCTTGCCAAAATGCAAAACTGCCTTCCAATGCAAGTGCTCCAAAGAATCATGATTCTCTTCCACAGATTACATCCGATgttaaaataacttctttAGAAATTGATGCTCACCAAAATGCAAAACTGCCTTCAGATGCAAGTGCTTCAGAGGACCTTGATTCTTTTTCACAAAAGCATGAAATTGACAGTGAACAACCCAAACGATCTACAAAAAGATTTGCTTCGGACCAACTAGAGACTGAGGCAAAGAAATTTGTATATGGATCAAGAAAGGCCAGTAATCCTGCATTTATTGTTGCACATTCAAAGTTTGAAGAGGTGAGTTCAATATCAAATTCAGGTAGGTCTAGCAGTTTATCATATCAGGATGAAGCAGTTGAGTCACAAGCAAATGCCCCTTCTGTTggtgaaaatattgaaaataggACAAAAGAGTTCTTCTCATCAGAGAATTCTACTCCTTTTACTTCCAGGATTGGCGGCTCTGAATGTGGTACTGAACTTTCTATTTCATCCACTCTTGATTCACCTGACATATCCGAGGTTGGGGTTACAGAAAATGAGCGCAAATGTAAAGATATGGCGGAAGAAGCTATTTGTAATCCTGACATTACATTAAACACTGATGCAGAGACCAATATTACCAGCGCCATTCCAGCTTCAAATGTACCTAGCCCTGTTCTGGGTCAGGCAGAGACAGATGATGACATTAATGACGAAATGGCTCATCAAGTGGTGGCTTTGGACTGCGAAGAATCAACTACACAGTCTGAGAAACTTGCACCTAGACTGCAGAGAGAACAGACAGAGGCCGTCGTTCAAGATATCCAGTTGTCCCCCGAAGCTTCACCAAGAAGCCATCTCACTGTCCCTGAGTCACAAGGAACTCCTTCAAGTCTGGTATCGGCGAAACCAAAAGAGAGCAAAACTGACAAGACTGGATCCAACAATAGACGTAAATCCCTGTCATCGGGTAACAAATCACCTGCAAATGCAAATCACGATTCAGGCTCAAGAGGTGGTAATAGGGAGGAACTGCCTAAAGATCAGCGGAATGGCAAGAGACGCAATTCCATTGGCTCAAAACCTGATCATTTTGATGAAGAACCAAGAGATAACAGTGGCAATAATTCTCCTCTTCCCCATTTTATGCAAGCCACAGAGTCAGCTAGGGCCAAGATTAATGCAAATAATTCTCCACGATCAAGTCCAGATGTGCACGACCGAGACGTCCAGGTTAAGAAGAGGCATTCTTTACCTGGTGCAACTAATAGGCAGAGTTCTCCGCGCATCAGACGATCAATGTCTCAAGCACAGCAGGGCAGAAAGGGAAATGGCTTAAACCCTCCTCCtgAGAGAAGATGGCAGAGGTG 2867 0.4123 MGKSTSCFKLITCGGDVVDKDDYQASEIKDSHDKRGWSFRKRSARHRVLSNTVITDTSSSANKESSECASVNFQQPENSNVVEKICTAHRSDEKPDKPQFSSVVDSQIYEPVAVTETESKADVDPVAVTEIESKADADPPESVVIIIQCAVRGFLAQRDLVKLKNVVKLQAAVRGHLVRRHAVGTLRCIQAIVKMQLLVRARHAQKLHPEKHLNQKQSKNDGLKTLGNENHMTKSNVTYTSIEKLLSNSFACQLLESTARNKSIHVKCDPSKADSAWKWLERWMSVSSTDTRELKKACSVTEQLDDSKESSSVSQLESAIRSEDFSESVDPKPIVGDPVLPSEDKEKLMTYDVDNFNFHGSHCASSIDEDNLEQALPELTVTSDVKVTSVEVDPYQNAKLPSDAIAPKDLDSLPQSTSDVNVISVEIDPHQNANLPSDASAPKDLDSFPQITSDVNVTSVEINPYQNAKLPSDASAPKDLDSLPQITSDVKITSGEIDPCQNAKLPSNASAPKNHDSLPQITSDVKITSLEIDAHQNAKLPSDASASEDLDSFSQKHEIDSEQPKRSTKRFASDQLETEAKKFVYGSRKASNPAFIVAHSKFEEVSSISNSGRSSSLSYQDEAVESQANAPSVGENIENRTKEFFSSENSTPFTSRIGGSECGTELSISSTLDSPDISEVGVTENERKCKDMAEEAICNPDITLNTDAETNITSAIPASNVPSPVLGQAETDDDINDEMAHQVVALDCEESTTQSEKLAPRLQREQTEAVVQDIQLSPEASPRSHLTVPESQGTPSSLVSAKPKESKTDKTGSNNRRKSLSSGNKSPANANHDSGSRGGNREELPKDQRNGKRRNSIGSKPDHFDEEPRDNSGNNSPLPHFMQATESARAKINANNSPRSSPDVHDRDVQVKKRHSLPGATNRQSSPRIRRSMSQAQQGRKGNGLNPPPERRWQR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00893 955 MobiDBLite consensus disorder prediction 550 573 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 815 835 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 768 802 - -
Bva10g00893 955 PANTHER PROTEIN IQ-DOMAIN 32 1 945 - -
Bva10g00893 955 Gene3D - 137 192 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 609 677 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 836 870 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 306 337 - -
Bva10g00893 955 PANTHER IQ-DOMAIN 5-RELATED 1 945 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 917 942 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 306 322 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 871 900 - -
Bva10g00893 955 Pfam IQ calmodulin-binding motif 164 181 IPR000048 GO:0005515
Bva10g00893 955 Pfam IQ calmodulin-binding motif 144 159 IPR000048 GO:0005515
Bva10g00893 955 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Bva10g00893 955 MobiDBLite consensus disorder prediction 497 519 - -
Bva10g00893 955 ProSiteProfiles IQ motif profile. 162 191 IPR000048 GO:0005515
Bva10g00893 955 MobiDBLite consensus disorder prediction 208 229 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 538 573 - -
Bva10g00893 955 MobiDBLite consensus disorder prediction 751 955 - -
Bva10g00893 955 SMART iq_5 139 161 IPR000048 GO:0005515
Bva10g00893 955 SMART iq_5 162 183 IPR000048 GO:0005515
Bva10g00893 955 Pfam Protein of unknown function (DUF4005) 870 937 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00893 Bva-Chr10 6795044 6800478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00893 588 955 IQD Protein Family AT1G19870 37.203 8.44e-47 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00893 - - gsj:114408593 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00893 10 6795044 6800478 Bva10g00893 10 6795044 6800478 ECH