Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00880 ATGGCAACAACAACGGCTACTTTTTTCTGCTTCATTTCTGTGGTCTACTTCACCACCTTAACCTTAACGTGTGCCTACGCCCAACGCAGCGCCGAGACAATGTTAGAGATCCAAGCCTTAATGGCCTTCAAGTTCAAACTCCACGACCCTCTCGGGTCCTTGGACGGATGGGATTCGTCCACGCCATCCGCTCCTTGTGACTGGCGCGGCATAGTCTGTTACAATAACCGAGTCCGCGAGCTCCGGTTGCCTCGTCTACAACTCGCTGGCCCACTCAGTGACTCGCTCTCCAACTTAATCCAGCTGCGCAAGTTAAGCCTTCACTCTAACAACTTGAATGGCTCCAttccttcttctctctcaCAATGCCTGCTTCTGCGAGCTGTTTACCTTCATAACAACTCATTATCCGGCAAACTCCCGCCGGCGCTTCTCAACCTTACGAACCTTCAAGTCCTCAACGTTGCTCACAACTTTCTTTCCGGCGGAATCCCCGGTGACTTATCAAAGTCTCTCCGGTTCCTCGATTTCTCGTCGAATGCATTCTTTGGTGATATCCCAGCTAATTTCTCTTCGAAATCTCAGCTACAGCTCATCAACTTCTCCTACAATCAGTTCTCCGGTGGAATACCGGTCACCCTTGGAACATTGGAACGGCTTGAGTATCTGTGGCTAGACTCTAATAACCTTTACGGGACCCTGCCTACCGCTCTTGCCAACTGCACTTCTCTTGTACATCTAAGCGCCCACGACAACTCGCTTAGTGGTTTGATTCCGGCGACTATTGGGACTATTCCCAAGCTTCAAGTGCTGTCATTGTCGCTAAACAAGCTCTCTGGTTCGGTCCCCACATCTCTTTTTTGCAACTTCCACTTGgccaattcttcttctttgagaATTGTTCAACTAGGCTTTAATGCACTCACGGGCTTTTCCCAGCCGCCAAACCCAACTTCTAATTGTATAAGCGTTTTGGAGGTTTTGGACCTTAAGGAAAATCACATTCACGGTGCTTTTCCCTCATGGTTGACCAATGCAGCAACGTCATTGAAGGCTCTAGATCTTTCAGGAAATTCGTTTTCTGGCACTTTGCCGGCGGATATTGGAAATCTTTTGAGATTAGAGGAGCTAAGGGTGGCAAATAATTCGTTATCTGGTGAGGTCCCTGCTGAAATTGTTAAATGTAGTTCGTTGAGGGTTCTTGATCTTCAAAGGAACCGGCTTTCAGGTACCATTCCTTGGTTTCTGGGCCAACTGAAGAACTTGAACATATTATCCCTCGCTGGTAACCTGTTTGCTGGTTCTATACCAACGAGTATTGGTACACTTTCTGAGCTTGAGTCTTTGAATTTAAGTAACAATAATCTCACAGGAATCATACCTGAAGAGATAATGGGATTACGCAACATGAGTGCTTTGAATCTCAGTAACAACAGATTTTCGGGCCAAATCTCATCTAATATTGGGTACTTGAGAGCTTTGGAGATTCTTAATTTGAGTGATTGTGGATTCTCAGGAAGGGTTCCTGCTAGTGTTGGAAGTTTAATGAAACTATCTCTTTTGGATTTAAGTAAGCAAAACCTTTCTGGGGACTTGCCAGTTGAATTTTTTGGATTACCAAGCCTGCAGGTTGTTGCTCTGGAAGAAAACCATTTATCTGGAGCTATTCCTGAAGGTTTCAGCAGCTTGGTTAGTCTACGTTATCTTAATCTCAGTTCCAACGCTTTTGTTGGTGGCATGCCAGCAACTTATGGGTTCCTGCCATCCTTAACTGTTCTCTCTCTATCGCACAATCGTATTTCTGGTACTATACCATCAGAGATTGGTAATTCCTCTCAACTTGAAGTGCTGGAACTTCGTTCAAATCGTCTGCGAGCTAGCATTCCAGGTGATATCTCCCATCTTTCTCGTTTGAAGGTGCTTGATTTGGGAGATAATAGATTGACGGGAGATATTCCAGATGAAATTTCTCAATGTTCTTCATTGACTTCTTTATTCTTGGATGCTAATCACTTAACCGGCCACATACCAGAATCCTTGTCAAAATTGTCAAACCTGACTAAATTAAATCTTTCTTCAAATCTATTGAGCGGAGAAATCCCATCTAATCTCTCACAAATTTCAGGATTGAACTACTTAAATCTGTCTGTTAACAATCTTGAAGGTGAGATTCCAGAAATGTTGGGTTCAAGGTTCAATGATGCTTCTGTATTTGCAATGAATCAGAGGTTATGTGGCAAACCCCTGCATAAGGAATGTGCAAATGTGAAAAGGCGAAGGAGAAAGAAGCTAATAATATTCATAGGTGTGGCGCTGGCGGGATTATGCCTTTTGGCACTATGTTGCTGTGGCTATATCTACAGTCTCTTAAGATGGCGCAAGAAGCTTAGAGAAGGGGTAACAGGGGAGAAGAAGCGGAGCCCTGCTCAAGCAAGCTCAGGAACAGAAAGAGGTCGTGGGAGTGGGGAAAATGGTGGGCCAAAACTGGTGATGTTCAATAACAAGATCACCTATGCTGAAACATTAGAAGCAACCAGACAATTTGACGAGGAAAATGTGTTGAGCAGGGGAAGATATGGGCTCGTGTTCAAAGCCTCCTACCAAGATGGAATGGTGCTCTCTATACGTCGTCTACCCGATGGATTCATTAACGAGGGAACCTTCCGAAAAGAAGCTGAATCCCTTGGCAAAGTAAAGCATAGAAATTTAACTGCCCTGCGTGGCTATTATGCAGGACCACCTGATGTAAGGCTCCTTGTTTACGATTACATGCCTAATGGAAATCTAGGGACACTCCTTCAAGAGGCATCTCAGCAAGATGGCCATGTACTGAATTGGCCAATGCGTCATCTAATCGCACTGGGCATTGCTCGCGGGCTAGCTTTCTTGCATTCAGTGTCTATTGTACATGGTGATCTGAAACCTCAAAATGTTCTTTTTGATGCTGATTTTGAAGCCCATTTGTCAGAATTTGGTCTAGACCGATTAACAATGGCTACTCCAGCAGAAGCATCTTCATCGTCAACCCTCGTTGGATCCTTAGGTTATGTATCTCCAGAAGCAGCATTGACTGGGCAAGCAACGAAAGAAGCTGATGTATACAGTTTTGGGATTGTACTGTTAGAGATACTAACAGGGAAAAAACCCGTGATGTTCACGGAAGACGAAGACATTGTGAAATGGGTGAAAAAACAATTGCAAAGAGGACAGATTTCAGAATTGCTGGAGCCTGGTTTGCTTGAGCTAGACCCGGAGTCGTCGGAATGGGAAGAGTTCTTATTAGGGATAAAAGTAGCTCTTCTTTGCACAGCGCCTGATCCTCTTGATCGACCATCCATGACTGACATTGTTTTCATGCTTGAAGGTTGCCGGGTCGGACCGGAGATCCCTTCCTCGGCTGATCCCACAACTCTACCTTCCcctgctta 3428 0.4431 MATTTATFFCFISVVYFTTLTLTCAYAQRSAETMLEIQALMAFKFKLHDPLGSLDGWDSSTPSAPCDWRGIVCYNNRVRELRLPRLQLAGPLSDSLSNLIQLRKLSLHSNNLNGSIPSSLSQCLLLRAVYLHNNSLSGKLPPALLNLTNLQVLNVAHNFLSGGIPGDLSKSLRFLDFSSNAFFGDIPANFSSKSQLQLINFSYNQFSGGIPVTLGTLERLEYLWLDSNNLYGTLPTALANCTSLVHLSAHDNSLSGLIPATIGTIPKLQVLSLSLNKLSGSVPTSLFCNFHLANSSSLRIVQLGFNALTGFSQPPNPTSNCISVLEVLDLKENHIHGAFPSWLTNAATSLKALDLSGNSFSGTLPADIGNLLRLEELRVANNSLSGEVPAEIVKCSSLRVLDLQRNRLSGTIPWFLGQLKNLNILSLAGNLFAGSIPTSIGTLSELESLNLSNNNLTGIIPEEIMGLRNMSALNLSNNRFSGQISSNIGYLRALEILNLSDCGFSGRVPASVGSLMKLSLLDLSKQNLSGDLPVEFFGLPSLQVVALEENHLSGAIPEGFSSLVSLRYLNLSSNAFVGGMPATYGFLPSLTVLSLSHNRISGTIPSEIGNSSQLEVLELRSNRLRASIPGDISHLSRLKVLDLGDNRLTGDIPDEISQCSSLTSLFLDANHLTGHIPESLSKLSNLTKLNLSSNLLSGEIPSNLSQISGLNYLNLSVNNLEGEIPEMLGSRFNDASVFAMNQRLCGKPLHKECANVKRRRRKKLIIFIGVALAGLCLLALCCCGYIYSLLRWRKKLREGVTGEKKRSPAQASSGTERGRGSGENGGPKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFKASYQDGMVLSIRRLPDGFINEGTFRKEAESLGKVKHRNLTALRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDLKPQNVLFDADFEAHLSEFGLDRLTMATPAEASSSSTLVGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGKKPVMFTEDEDIVKWVKKQLQRGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMTDIVFMLEGCRVGPEIPSSADPTTLPSPA 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00880 1142 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Bva10g00880 1142 Pfam Protein kinase domain 850 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00880 1142 SUPERFAMILY L domain-like 36 340 - -
Bva10g00880 1142 SUPERFAMILY L domain-like 518 731 - -
Bva10g00880 1142 Pfam Leucine rich repeat 421 480 IPR001611 GO:0005515
Bva10g00880 1142 Pfam Leucine rich repeat 517 575 IPR001611 GO:0005515
Bva10g00880 1142 Pfam Leucine rich repeat 613 672 IPR001611 GO:0005515
Bva10g00880 1142 ProSiteProfiles Leucine-rich repeat profile. 589 611 IPR001611 GO:0005515
Bva10g00880 1142 ProSiteProfiles Protein kinase domain profile. 848 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00880 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Bva10g00880 1142 PRINTS Leucine-rich repeat signature 446 459 - -
Bva10g00880 1142 PRINTS Leucine-rich repeat signature 587 600 - -
Bva10g00880 1142 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 1138 - -
Bva10g00880 1142 Gene3D Ribonuclease Inhibitor 166 311 IPR032675 -
Bva10g00880 1142 Gene3D Ribonuclease Inhibitor 471 756 IPR032675 -
Bva10g00880 1142 Gene3D Ribonuclease Inhibitor 395 470 IPR032675 -
Bva10g00880 1142 Gene3D Ribonuclease Inhibitor 312 394 IPR032675 -
Bva10g00880 1142 ProSiteProfiles Leucine-rich repeat profile. 445 466 IPR001611 GO:0005515
Bva10g00880 1142 SUPERFAMILY L domain-like 295 581 - -
Bva10g00880 1142 SMART LRR_typ_2 635 659 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 467 491 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 265 289 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 371 395 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 443 466 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 539 562 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 99 123 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 217 240 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 563 586 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 683 707 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 587 611 IPR003591 -
Bva10g00880 1142 SMART LRR_typ_2 147 171 IPR003591 -
Bva10g00880 1142 Gene3D Phosphorylase Kinase; domain 1 823 923 - -
Bva10g00880 1142 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Bva10g00880 1142 Gene3D Ribonuclease Inhibitor 35 144 IPR032675 -
Bva10g00880 1142 SMART serkin_6 848 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00880 1142 Pfam Leucine Rich Repeat 349 371 IPR001611 GO:0005515
Bva10g00880 1142 SUPERFAMILY Protein kinase-like (PK-like) 827 1131 IPR011009 -
Bva10g00880 1142 PANTHER LRR RECEPTOR-LIKE KINASE 6 1138 - -
Bva10g00880 1142 MobiDBLite consensus disorder prediction 801 828 - -
Bva10g00880 1142 Gene3D Transferase(Phosphotransferase) domain 1 924 1128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00880 Bva-Chr10 6726080 6729508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00880 1 1142 Receptor kinase-like Gene Family AT4G36180 63.976 0.0 1383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Bva10g00880 Pkinase 5.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00880 - - jre:108991311 1694.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00880 10 6726080 6729508 Bva10g00880 10 6726080 6729508 ECH