Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00848 atggAGTCTTCCAATCCCCACGACCTACATCATCCGCTCCAAGACCAACCCGCTCCTGTTGACACTGCTACTTCTTTATCGGCCTATGGAGTTGGAAGCAGCCATTCTTGGACACCAAATATCACTTTAAATGCTGTTAACTTGAACCAAAACCTCCAAGAATCTGGAGCCAGATCACGAGCTTCAACGCAAGACAACGATATTCAAGCCCTTTCTCTCAATGGTTCTATGATCCAACATTTAGGTTATCTTTGGGGAAGCAGTGATGGAGAAAGCTGCATAAGTAGCAGTCAGCGCAACCATGATATAGACCTACAGTTTTCAAAGATAAAGGAAGAGATCTCATCAGAAACTTTCCCAAAATTCACCGAAATACTAAACAGTCCCTCATGTATGGAACACTACCGGGCTGCACCTACCACGAGCCACATAAAGAATGAGAGCAAAGATTTTAATGCCCTTAGCGAGAAGCTCTTGCTCAAGACCCTATCTTCAGGAGGAGACTTCTATTCTACTGGTAATTATGGTATGGGAGTGGGTGTCCCAAGTAGAGGGAGCTTTAGCCAGATTTACCCCAGTATAAATATCTCAAACTTGAACCAATCATCCCCAGCAGCAATTTCAAGCTCCTTGGATATCAACATGCAGTCATTGGATCTATTGAGCTCTCCAAGATTTAATGGCGGATTAATGAGCCAGCGTTCACAAGATGGTCTTGGTCTTGGTACCTTCACAGATAACCTTTCCTCTCATATGCAGCAGCGGCACCCCACTGACAGGTCGTCTAGTAATCCATCTCACTTGATCAATGGCACGGCAGAAACCAAGCGAAGCAGCCCTTTAATAGAGTCAAAGGCTTCTCAATCTCAAGCAGTATCTAAGAAATCGCGATTGGAATCTCGCGCATCATGCCCACCCTTTAAGgTTCGGAAAGAGAAACTAGGAGATAGGATTGCGGCGCTTCAGCAGTTGGTGGCTCCATTTGgcaagACAGACACAGCATCCGTACTTATGGAGGCCATAGGATACATCAAATTCCTTCAAAACCAGGTCGAGACGCTGAGCGTTCCATATATGAGGTCATCCCGCAACCAGACCACAAGAGTGATGCGAGGGGGCCCAGGCATAGAAGACGCAAAGGAGGAACCAAAGCAAGATCTTAGGAGCCGAGGGCTCTGTCTAGTGCCATTGTCATGCATGTCTTATATAACAGGTGATGGTGGCACTGGAGTGTGGCAACAGCCAGACTTCGGTGGAGCGActta 1265 0.4609 MESSNPHDLHHPLQDQPAPVDTATSLSAYGVGSSHSWTPNITLNAVNLNQNLQESGARSRASTQDNDIQALSLNGSMIQHLGYLWGSSDGESCISSSQRNHDIDLQFSKIKEEISSETFPKFTEILNSPSCMEHYRAAPTTSHIKNESKDFNALSEKLLLKTLSSGGDFYSTGNYGMGVGVPSRGSFSQIYPSINISNLNQSSPAAISSSLDINMQSLDLLSSPRFNGGLMSQRSQDGLGLGTFTDNLSSHMQQRHPTDRSSSNPSHLINGTAETKRSSPLIESKASQSQAVSKKSRLESRASCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMRSSRNQTTRVMRGGPGIEDAKEEPKQDLRSRGLCLVPLSCMSYITGDGGTGVWQQPDFGGAT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00848 421 Gene3D - 308 369 IPR036638 GO:0046983
Bva10g00848 421 MobiDBLite consensus disorder prediction 1 26 - -
Bva10g00848 421 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 347 IPR011598 GO:0046983
Bva10g00848 421 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 140 406 - -
Bva10g00848 421 CDD bHLH_AtbHLH_like 305 355 IPR045239 -
Bva10g00848 421 PANTHER OS01G0105700 PROTEIN 140 406 - -
Bva10g00848 421 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 308 362 IPR036638 GO:0046983
Bva10g00848 421 MobiDBLite consensus disorder prediction 241 297 - -
Bva10g00848 421 MobiDBLite consensus disorder prediction 241 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00848 Bva-Chr10 6533841 6537808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00848 20 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 43.833 5.91e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00848 - - jre:108991305 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00848 10 6533841 6537808 Bva10g00848 10 6533841 6537808 ECH