Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00827 ATGGCCTGTTTTTGtgtcatctttttctttctattggGTTCCTGTGCTTTGACGAATGCCACTGACACGGAAACGGCGATTCTGATAGTGGTTGACCAGTCTGGCATGGgagattttcagaaaatacaAGACGCCATTGATGCTGTTCCATCCAATAACTCCCAACTCTTTTACATCCAGGTTAACCCTGgaatatataaagagaagatACTTGTACCCGCGGACAAGCCCTTCATTACACTCGGTGGTACAAACGCAGACAACACGATCATTTCATGGAATGACAGTAGCGACATATTTCAGTCGCCAACTTTCACTGTCTTGGCTTCTGATTTTTTGGGACGACAAATAACTATCCAGAATAGTTACGGGTCTGGTGCAAAAGCAGTTGCGTTGAGGGTTTCAGGTGATAGGGTAAGATTTTCTGGTTGTAGAATTCTGTCTCACCAGGATACCCTACTTGACGACACTGGACGCCACTACTACACCAATTGTTACATCGAAGGAGATGTTGACTTCATTTTCGGAAATGCAGCTTCTCTATACGAGAGGTGCCACTTGCACTctctttcaaaagaaaatggagccATCACAGCCCAAAGTAGAGGATCGGCAGAGGAAGACACGGGGTTTGTCTTTTTGGGTTGCAAAATCACAGGCGTCAACAGTGGCACTGCCCTGCTCGGGAGGCCTTGGGGCCCTTATGCTAGAGTCGTGTTTGCCTACACCTATATGTCCAGCGTAATTCTGCCCCAGGGTTGGGATGACTGGGGAGACTCATCCAAACAAGAGACGACATATTTGGGGCAATACAGATGCTATGGTCCAGGAGCCAAGACAGGAAGAAGGGTTCCGTGGTCACACACACTAACAGCCCAAGAAGCTGAACCCTTCATGTCCAAGGATCTTATTGATGGCAAAACTTGGATTAGGTCTGCTCCAACCAAATTCAGGAGATTCTCGTATCCAAATCCTGCCAAAATTGGTGGACGCTA 995 0.4402 MACFCVIFFFLLGSCALTNATDTETAILIVVDQSGMGDFQKIQDAIDAVPSNNSQLFYIQVNPGIYKEKILVPADKPFITLGGTNADNTIISWNDSSDIFQSPTFTVLASDFLGRQITIQNSYGSGAKAVALRVSGDRVRFSGCRILSHQDTLLDDTGRHYYTNCYIEGDVDFIFGNAASLYERCHLHSLSKENGAITAQSRGSAEEDTGFVFLGCKITGVNSGTALLGRPWGPYARVVFAYTYMSSVILPQGWDDWGDSSKQETTYLGQYRCYGPGAKTGRRVPWSHTLTAQEAEPFMSKDLIDGKTWIRSAPTKFRRFSYPNPAKIGGR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00827 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 8 313 - -
Bva10g00827 331 PANTHER PECTINESTERASE 11-RELATED 8 313 - -
Bva10g00827 331 SUPERFAMILY Pectin lyase-like 25 317 IPR011050 -
Bva10g00827 331 Pfam Pectinesterase 29 306 IPR000070 GO:0030599|GO:0042545
Bva10g00827 331 ProSitePatterns Pectinesterase signature 2. 167 176 IPR033131 -
Bva10g00827 331 Gene3D - 24 319 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00827 Bva-Chr10 6453866 6455512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00827 28 310 Carbohydrate Esterase AT5G47500 43.667 1.55e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00827 K01051 - qsu:111996229 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00827 10 6453866 6455512 Bva10g00827 10 6453866 6455512 ECH