Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00800 ATGGCGGGTCGTCGGGAAGGGTTGTTGACTCGAGAAAAAGGCCAATCGCTTCAGGTATCTCGAATCATTATAGCTGTAATGATTGGTGTTCTTCTCGGATGCGTCTTCGCCTTGTTATCACCTCGTGGATTCTTCAGCTCCAATCGATACATTCATAGTCGTCCAATTGGGATTTCGGATCTTCAGattGAATCGTCTGCATGTGAATCATCAGAAAGACTTAATGCTCTGAAGTCGGATATTCTATCAGTGACGGAGAAGAATTCTGAGCTCAAGAAGCAGATTAAAAGTCTGACAGAAAAACTGCGGCTGTCTGAGCAAGGAAAGGGTCATGCACAGCAACAGTTTGTAATGCTGGGTGAGAAACACAAGGCTGGCCCTTTTGGCACTGTCAAGGGTCTGAGAACTAATCCAACTGTCATTCCTGATGAATCTGTAAATCCAAGACTGGccaaaattttggagaaagtTGCTATTTCGAAAGAGCTTATAGTTGCACTGGCAAACTCTAATGTGAAAGCCATGTTAGAGGTCTGGTTTAGCAACATCAAGAGGGCTGGCATACCTAATTATTTAGTAGTGGCATTAGATGACAACATAGAAGAATTCTGCAAATCGAATGATGTCCCATTCTATAGAAGAGATCCAAATGAAGGTATTGATACAATTGCTAAAACAGGTGGTAACCATGCTGTCTCGGCCTTGAAATTTCGTATTCTAAGAGAATTTCTACAATTGGGTTACAGTGTTCTTCTCTCGGATGTTGATATTGTTTACCTACAGAACCCCTTTGACTATCTTTATCGGGATTCAGATGTCGAGTCTATGTCTGATGGTCACAGTAATGCGACAGCTTATGGGTATAACGATGTCTTTGATGAACCTGCAATGGGATGGGCTCGATATGCTCATACGATGAGGATTTGGGTATACAATTCTGGTTTCTTCTACATAAGGCCTACCCTTCCTTCAATTGAACTCTTGGATCGCGTTGCTGATCGGCTTTCTCATGATTCTAAATCATGGGACCAAGCAGTTTTCAATGAAGagctctttttcccttcacgTCCTGGTAAGGATGGGCTTCATGCTGCGAAAAGAACTATGGATATCTATCTATTTATGAACAGCAAGGTTCTCTTTAAGACTGTTAGAAAAGATGCTAGACTTAAAAAGTTGAAGCCAGTGATTGTACATGTCAACTATCATCCTGATAAATTCGCGAGAATGAAGGCAGTAGTAGATTTTTATGTCAATGGAAAACAAGATGCACTGGAACATTTCCCGGATGGTTCTGAGTA 1301 0.4035 MAGRREGLLTREKGQSLQVSRIIIAVMIGVLLGCVFALLSPRGFFSSNRYIHSRPIGISDLQIESSACESSERLNALKSDILSVTEKNSELKKQIKSLTEKLRLSEQGKGHAQQQFVMLGEKHKAGPFGTVKGLRTNPTVIPDESVNPRLAKILEKVAISKELIVALANSNVKAMLEVWFSNIKRAGIPNYLVVALDDNIEEFCKSNDVPFYRRDPNEGIDTIAKTGGNHAVSALKFRILREFLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHSNATAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVADRLSHDSKSWDQAVFNEELFFPSRPGKDGLHAAKRTMDIYLFMNSKVLFKTVRKDARLKKLKPVIVHVNYHPDKFARMKAVVDFYVNGKQDALEHFPDGSE 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00800 433 Pfam Nucleotide-diphospho-sugar transferase 188 407 IPR005069 -
Bva10g00800 433 PANTHER ARABINOSYLTRANSFERASE RRA3 1 433 IPR044290 GO:0016757|GO:0080147
Bva10g00800 433 PANTHER GLYCOSYLTRANSFERASE 1 433 - -
Bva10g00800 433 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Bva10g00800 433 SUPERFAMILY Nucleotide-diphospho-sugar transferases 164 363 IPR029044 -
Bva10g00800 433 Coils Coil 74 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00800 Bva-Chr10 6341140 6343607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00800 K20783 - twl:120009176 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00800 10 6341140 6343607 Bva10g00800 10 6341140 6343607 ECH