Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00776 atgatCACAAAGGCGCCCCTGTTCATCTTTGTATTTGTACCTCTGTTGCCCATAATCTCAGCCCAAGTGAACAAACGCCAGTGTCGCGAAACATGTGGCTCCAACAAAACCTACTCTTACCCTTTTGGTTTCTCCTCCGGTTGCCCAATCCGCCTCAACTGCACCGACGGCGCAGTCTTCGTCGGAGAATTCCCAGTACAATCCGTAAATCAAGATACCATAATCGTCGATGCTATTCCCAATTGCAATCGTCCAATAGATAGCTTCCGCCAACTCTTCGGCCACAAATACGCACCCACCGCTAGAAACGCACTTCTTCTACAGAATTGCACCGGCCGGACCGTCCCCTGCATGATACCTGCGACCATGGTACAGACTCACTTTGAGTCGCAAGACTGCAAATCCGGCAGTGGCAATTTGAGCTGTTATTTCGAGAATACGACCGAAGGCTTTATGAATTACAACAATATCGCCAATAGCCACTGCCTTTCCCTTATGTCCTCTATATCGGCAGATCATTTATCCAACAAATCGGCGCCGGTTTCTTTGGAGGTTGCAACGATTGAACTTGGCTGGTGGCTTCAAGGGGATTGCAAATGTTCTGCGGATGCCAATTGTACAAAATTGTATCTCCCCATTAATAGAAAGTCTGCATATCGCTGCCGTTGCAATGAAGGCTTCGTCGGCGATGGCTATGATGCCGGGAAAGGTTGCCGGAAAGCCTCTGAAACATGCAACCCAGTCAAGTATATGTCTGGCCGATGTGGAGGAACAACCAGATTTGTTGTCTTAATTGGAGGAATTGTGTTGGGAGCTGCATTGATGATCAGTCTGGGTCTGATATGTTGTTTGTTTCGCCGGCGTAGACACAAATTGAGAGTGACAAAGAGCACAAAAAGGCGATTCACAGAAGCTACTGGGCATTACAGTGTTCCTATTTATACCTACAAAGATATCGAGAAAGCGACAAATAGCTTCTCAGATAAACAGAGACTGGGAAACGGGGGATATGGTACAGTCTATGCTGGGAAACTTCACAGTGATGATTGGGTTGCCATCAAGAGGATCAAACATAGAGAGACAGGGAGCATTGAACAAGTAATGAACGAGATCAAGCTGCTTTCCTCCGTGAGCCACCCGAATTTAGTACGCTTGTTGGGTTGCTCCATAGAATATGGAGAACAAATACTTGTTTATGAATTCATGCCCAATGGAACCTTGTGTCAACATTTGcacagagagagaggaaatggACTGTTATGGCCAATTCGAGTCACGATTGCTGCTGAAACAGCCCAAGCTATAGCACATCTTCACTCTGCCATTAACCCCCCCATATATCATAGAGATATCAAGTCAAGCAATATATTATTGGATTACAATTTTAGATCTAAAGTAGCAGATTTTGGACTTTCCAGACTTGGGATGACTGAGACATCCCACATTTCAACTGCCCCTCAAGGAACACCAGGCTACGTTGATCCACAATATCATCAAGACTTCCACCTTTCTGATAAAAGTGATGTATATAGCTTTGGTGTTGTTCTGGTTGAGATAATAACTGGATTGAAAGTGGTGGATTTTCTGCGCCCTCAGAATGAGGTAAATTTGGCTGCTCTTGCCACAGATAGGATTGGGAAAGGGCTTCTCAGTGAGATTATAGACCCATTCCTTCAAGCAAATCAGGATCCTAACACCATTTCCTCCATACATAAGGTAGCTGAGCTAGCATTTAGATGCCTTGCATTCCACAGGGACATGAGACCTTCCATGACAGAAGTAGCAGCTGAACTAGAACAGATTAGGCTCAGTATGTGGATAGCTACAACAGAAATCTTCTCTTGGTCTCCTCCTTCTGATCAAACTAAGAAAGCAATAAGTTTGACAGAGATAAGGGGCAGTTCAGAGAGTAAAGGCCTTCTCTCCCTGCACATTGATTCTGTTCCATCAAGTTCAATGGAAAGGCCAAAGAATGGTTCACCAGTTTCGGTGCAAGACCCAGAGCTATGGTTGAGTGAACAGAGCTCTCCTCCTTCATCGAGTAGTTTACTAAGTAAATG 2060 0.4447 MITKAPLFIFVFVPLLPIISAQVNKRQCRETCGSNKTYSYPFGFSSGCPIRLNCTDGAVFVGEFPVQSVNQDTIIVDAIPNCNRPIDSFRQLFGHKYAPTARNALLLQNCTGRTVPCMIPATMVQTHFESQDCKSGSGNLSCYFENTTEGFMNYNNIANSHCLSLMSSISADHLSNKSAPVSLEVATIELGWWLQGDCKCSADANCTKLYLPINRKSAYRCRCNEGFVGDGYDAGKGCRKASETCNPVKYMSGRCGGTTRFVVLIGGIVLGAALMISLGLICCLFRRRRHKLRVTKSTKRRFTEATGHYSVPIYTYKDIEKATNSFSDKQRLGNGGYGTVYAGKLHSDDWVAIKRIKHRETGSIEQVMNEIKLLSSVSHPNLVRLLGCSIEYGEQILVYEFMPNGTLCQHLHRERGNGLLWPIRVTIAAETAQAIAHLHSAINPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFLRPQNEVNLAALATDRIGKGLLSEIIDPFLQANQDPNTISSIHKVAELAFRCLAFHRDMRPSMTEVAAELEQIRLSMWIATTEIFSWSPPSDQTKKAISLTEIRGSSESKGLLSLHIDSVPSSSMERPKNGSPVSVQDPELWLSEQSSPPSSSSLLSK 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00776 686 SMART serkin_6 326 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00776 686 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 624 IPR045274 GO:0007166
Bva10g00776 686 MobiDBLite consensus disorder prediction 645 686 - -
Bva10g00776 686 Gene3D Phosphorylase Kinase; domain 1 287 401 - -
Bva10g00776 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Bva10g00776 686 Gene3D Transferase(Phosphotransferase) domain 1 402 639 - -
Bva10g00776 686 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Bva10g00776 686 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00776 686 SUPERFAMILY Protein kinase-like (PK-like) 302 599 IPR011009 -
Bva10g00776 686 Gene3D Laminin 193 235 - -
Bva10g00776 686 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 21 624 - -
Bva10g00776 686 ProSiteProfiles Protein kinase domain profile. 326 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00776 Bva-Chr10 6229323 6232959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00776 1 683 Receptor kinase-like Gene Family AT2G23450 50.000 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva10g00776 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00776 - - gmx:100777480 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00776 10 6229323 6232959 Bva10g00776 10 6229323 6232959 ECH