Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00770 ATGTTCGCAGCCTCACACCCACTAATGCCAACCTTAAACCCTTTGCCTGTGCCAGACCTCTCTTTAAACATCAGCCTACCATCTATTTCAGACGGTGAAGCAAAAGAAGTGGGAAGCTTCAATGGATTCACAAGCAAATCGCTTTACAATGAAATGTGCTCAACCTCTGATTCTGGTAGTAGTGGAAGTGAGTTGAGCCACGAAAATGGCTTTTTCAACTCTGACACTCTTATTAACCTTCGCCACCGCCAGCCCACGTTGAGATTAGGCTTTGAAACCACAAATTTTAATCCCCATCCAGTACAAGGTCTCTCAGGAAACGttaatcatcatcatcaccaaAATCACCAGCTTCATATCTACGGGCGTGACTTCAAACGAAATGCAAGAGTCATTAATGGCGTGAAAAGAAGCATCAGAGCTCCCAGAATGAGATGGACTACAACCCTACATGCCCATTTTGTTCATGCTGTTCAGCTTCTCGGCGGTCATGAAAGGGCCACTCCAAAGTCCGTGTTAGAGTTGATGAATGTTAAGGATCTAACCCTAGCTCATGTCAAGAGTCACTTGCAGATGTATAGAACGGTGAAGAGCACTGACAAAGGTACAGGTCATGGGCAGACAGATATGGGCTTCGCCCAAAGGCCACAAACCGTCGATGTGCATGGAAATGGACTCTCATCGCCTTCTGAGAGAGCCGATCCGTCACTGCCGCTGCAAATATCCCACAGGGCACCATGGCAGTCATTAACAGAggcaaatacaaataattctGTACAAAAAGCGGAAACTGGTTCGACTTATTCTCATCTCAAGGCAATGGTAGATGGACAAAATGAAGGCCTGTCGTCGAATAGCGTGAAGGAGAGGTTGGATTCTAGCTCTTTGTCACGTTCGGATATGATGCTTAACCTAGAATTCACTCTTGGAAGACCCACTTGGCAAAAGGACCATGCCGAATCTTCAAAAGAGTTAACTCTTCTCAAGTGTTA 992 0.4435 MFAASHPLMPTLNPLPVPDLSLNISLPSISDGEAKEVGSFNGFTSKSLYNEMCSTSDSGSSGSELSHENGFFNSDTLINLRHRQPTLRLGFETTNFNPHPVQGLSGNVNHHHHQNHQLHIYGRDFKRNARVINGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDMGFAQRPQTVDVHGNGLSSPSERADPSLPLQISHRAPWQSLTEANTNNSVQKAETGSTYSHLKAMVDGQNEGLSSNSVKERLDSSSLSRSDMMLNLEFTLGRPTWQKDHAESSKELTLLKC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00770 330 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 330 - -
Bva10g00770 330 SUPERFAMILY Homeodomain-like 139 196 IPR009057 -
Bva10g00770 330 Pfam Myb-like DNA-binding domain 143 194 IPR001005 -
Bva10g00770 330 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 330 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva10g00770 330 Gene3D - 141 198 - -
Bva10g00770 330 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 142 195 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00770 Bva-Chr10 6203251 6206806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00770 17 215 G2-like Transcription Factor Family AT5G42630 56.373 1.31e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva10g00770 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00770 - - gmx:100780143 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00770 10 6203251 6206806 Bva06g02045 06 13651478 13654859 BWGD
Bva10g00770 10 6203251 6206806 Bva10g00770 10 6203251 6206806 ECH