Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00708 ATGATTGACCAGTTAAAGTTGTCGGAGGATCAGATGGAAATGATGATGACGATGATGCAGCTCCCTGACTTGTGTGCTCCTTACGGAGACGACGTCGTTGCCGACTTGCCACCGCAGGAATTCTCTGATGCAAGTAGCGGCGGCGGTAACAGCAACAGCATATATGGTGCAAATACTTTGTCACATTTTATAGATATGGCCTCTTCGTCTTCCTTAACAAGCACACCACCATCTTTTACCATGTCTTTCACTAATAACCCTACACCTACACCTACCACCATCACTAACACTTTGCTTCAAGCTCCATCGCCTTTGCTGCCCAATTCAAGCAAGGACATGCAATTAACCGTTAACGGTAACGGTACGACATCAGATAAGAGGAATTCGATGGCGGCGATGAGAGAGATGATATTCAGGATAGCGGCCATGCAGCCGATACACATAGACCCGGAGTCAGTAAAGCCTCCTAAGCGGAGAAACGTGAAGATCTCCAAGGATCCGCAGAGCGTGGCGGCTCGGCATCGTAGAGAAAGGATAAGCGAGAGAATAAGGATACTGCAGAGACTGGTCCCAGGAGGGACTAAGATGGATACGGCCTCTATGTTGGACGAAGCTATTCACTatgttaaattcttaaaaactcAGGTTCAATCACTGGAACGTGCTGCAGCTAATAGATCATCAGGCTCTGGGATTGCTTTCCCTCTTGCAATGTCTACTAGCACCACTACCACCTCATATCTTCCTATGCCAAAACCTTACCAACTTCCTCCTCAAAACCTTCGCCATTACGGAGatgctta 803 0.4645 MIDQLKLSEDQMEMMMTMMQLPDLCAPYGDDVVADLPPQEFSDASSGGGNSNSIYGANTLSHFIDMASSSSLTSTPPSFTMSFTNNPTPTPTTITNTLLQAPSPLLPNSSKDMQLTVNGNGTTSDKRNSMAAMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRSSGSGIAFPLAMSTSTTTTSYLPMPKPYQLPPQNLRHYGDA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00708 267 MobiDBLite consensus disorder prediction 107 126 - -
Bva10g00708 267 SMART finulus 169 218 IPR011598 GO:0046983
Bva10g00708 267 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 222 IPR036638 GO:0046983
Bva10g00708 267 MobiDBLite consensus disorder prediction 248 267 - -
Bva10g00708 267 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 2 261 IPR045843 GO:0003700|GO:0006355
Bva10g00708 267 Pfam Helix-loop-helix DNA-binding domain 172 212 IPR011598 GO:0046983
Bva10g00708 267 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Bva10g00708 267 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 2 261 - -
Bva10g00708 267 Gene3D - 162 229 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00708 Bva-Chr10 5881632 5882435 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00708 121 229 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 85.321 9.87e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva10g00708 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00708 - - zju:107419982 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00708 10 5881632 5882435 Bva10g00708 10 5881632 5882435 ECH