Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00701 ATGTTGTCTGCCTACTACATCCAGAAGGGTCTCCTCTTCAGGAAACCACAGAATGACCCAGATCTCATCAAGTCTTTATTGGAGAGGCTTAAGCACTCGCTCTCCATCGCCCTCTTTCATTTCCATCCCCTCTCTGGTCGCTTTGTCACCCCAAACCCTCCCTCCTATTTTGTTCTCTCTGAGATATTTCAAGCAAAAGGGCATCAATATGACATTGGAGTTCCTATTTCTTGCCCACCCATTCTAAATCGTTGGTTCCCGGAGGGTCATGGTCCAAAAATCAATCTTCCCTTCAAACATCACGATGAATTTATTCGCAGATTCCAAGCACCAAAACTTAGACAGAGAATCTTCCACTTCTCAGCAGAGTCCACTGCAAAACTGAAAGCAAAGGCCAATCGAGAATCAAATACGAACAAAATCTCTTCATTCCAGTCTTTATCAGCATTGGTTTGGAGATCTTTAACTCGTGCGCGTCGTCTTCCATATGATCAGACAACTACGTGCAAGTTGGCCACTAATAACCGAACAAGGATGGAACCACCTTTGCCAAAAGAATACTTGGGAAACTCAATTCATGCGGTGGGTGCAAGCGCAACCGCCGGCGAATTGCTCCAACATGACCTTGGATGGGCAGCATGGAAGTTGCATCTTGCTGTTGCTAACCATAACGACACGGCAGTGCGTCAATACCTCGAAAAGTGGCTAGAATCACCTGCGTA 722 0.4598 MLSAYYIQKGLLFRKPQNDPDLIKSLLERLKHSLSIALFHFHPLSGRFVTPNPPSYFVLSEIFQAKGHQYDIGVPISCPPILNRWFPEGHGPKINLPFKHHDEFIRRFQAPKLRQRIFHFSAESTAKLKAKANRESNTNKISSFQSLSALVWRSLTRARRLPYDQTTTCKLATNNRTRMEPPLPKEYLGNSIHAVGASATAGELLQHDLGWAAWKLHLAVANHNDTAVRQYLEKWLESPA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00701 240 Gene3D - 1 70 IPR023213 -
Bva10g00701 240 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 58 - -
Bva10g00701 240 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 58 239 - -
Bva10g00701 240 Gene3D - 100 239 IPR023213 -
Bva10g00701 240 Pfam Transferase family 2 50 - -
Bva10g00701 240 Pfam Transferase family 91 237 - -
Bva10g00701 240 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 58 - -
Bva10g00701 240 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 58 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00701 Bva-Chr10 5839927 5840741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00701 73 237 Monolignol Biosynthesis Gene Families AT5G48930 31.844 2.49e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00701 - - gmx:100775661 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00701 10 5839927 5840741 Bva10g00701 10 5839927 5840741 ECH