Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00680 ATGCACAGTCCAACCTTGATCCTCCTCCTCCTTTCTCTGTTGCTGCGGTTTtctgctttattttctttggcaGCTACTGATACTCTGGCAGATGGCTCGTCTCTCTGTGTTGAGGAACCAGACGACATTCTCGTTTCGCCCAATGGAGATTTCCATGCGGGTTTCTTTCCAGTGGGTGATAATGCTTTCGGCTTTTCCATATGGTTTAATAGTTCCAAAGAACCCACTCTTGTGTGGATGGCCAATCGAGACCAACCCGTAAATGGAAAAGCTTCAACACTCTCACTTCTCAAAAATGGAAATCTCATTTTGAGGGATGCTGGAAGAAAGACCATCTGGAGTAGCTCGACCTCGTCCAACTCCCGAGTGCAGCTGAAGCTCATGAACAATGGTAACCTTGTACTCCGAACTTTACAAGGTAATATCCTTTGGCAAAGCTTTGACTCGCCAACGGATACCCTTCTTCCTGGTCAACCACTAACGGAGCGAGCTAACCTCGTTTCATCAAGGAGCAAAACCAACTATTCCTCTGGTTTCTATAGGCTTTATTTCGACAACGACAACGTTCTTCGCTTGCTTTTTAAAGGTCCTGATGTTTCCAGCGTCTTCTGGCCTTACCCGTGGATGACACCAATTGAATTACAAAGGTCCACCTATAACATTAGCAAAACTGCGGTTCTTGATCCATATGGCCAATTCAACTCCTCTGATGAATTCAGTTTCTCATCCACCGATTACGGTGAGCGCATCTACAGACGATTACTGGTGGATCCTGATGGTAATATCCGTCTCTATAGTTTCAACGGAGGAACTAAAACGTGGGAGGTTTCGTGGCAAGCCATTTCTGATCCATGTACCGTTCATGGCATCTGTGGACCTAACAGCATGTGCACTTATCATCACGCCTTGGGCAGGACTTGTTATTGCTTGCAAGGGCATAAGATCAAGAATCCCAACGACTGGACACAAGGTTGTGTACCTGAATTTGCAATTGCTGATACCACCAACAATCACAGTACTGATCAGCTTAGGTTCCTGCAGCTGTCCAGCTTCGAATTCTATGGGTATGACATTGGCATATACCGTCTTTTGAACCTATCTGAATGTTTACATATGTGCTTGGAAGCTGGTGATAATTGCAAAGCTGTACAAGTCAAAGTAGATTATGAAGGTGGTAATATGTTATGTTACCCTAAAACACTCCTGCTCAATGGACGGGATGCCCCCAATTTCTCGGGacatatatatctaaaattgCCCAAACCGATTGTGCTCTCCTCCAACAAGCCTCGTAAATATTTGCCATTGAACTGCTCTGTTGCTTCGTTTCGGCAGTTAAATACGACTTTTGAAAAGTCAAGCACAAACACCTCTTTGAATATTCTACTATGGTTCGCTTCTGGGATTGGTGCCCTTGAGTTGACTTGTATTTTCCTTGTTTGGTTTTGCTTGTTTAGATCCAGTAAGCAAGCTGGTACACTTACAGGAGAATCAAGACAATTACTTTCTGCCACAGGATTTCAGAGATTCACCTATGAGGAGCTTAAAAGGGCAACGAGGGGATTCACCGAGGAGATTGGACGAGGATCAGGAGGGATTGTATACAAAGGGATTTTAGATGATGATCGTGTTGCAGCAATCAAGCGCCTAAGTAGTGATTCTAATCAAGGAGAAGCTGAATTCCTAGCAGAAATTAGCACAATTGGGATGGTGAATCACATGAATTTGATAGACATGTGGGGATACTGCGTTCATGGCAAGGATAGGCTTTTGGTGTATGAGTACATGGAACATGGATCCTTAGCAGAGAACCTCTCGTCTAGTGTGCTTGACTGGAACAAGAGATTCAATATTGCTGGGGGCACAGCAAAAGGTTTGGCTTATTTGCATGAAGAGTGCTTGGAATGGGTTTTACATTGTGATGTGAAACCTCAAAACATTCTTTTAAACAATAACTTCCAACCAAAAGTAGCAGATTTTGGTTTgtctaaacttttaaatagaAATGAGAGTAACACTAATTCTAAGTTCTCAAAAGTAAGAGGAACAAGAGGTTATATGGTTCCAGAATGGGTTTACAATTTCCATATTACATCTAAAGTGGATGTTTATAGTTATGGAATTGTTGTATTAGAAATGATAACAGGAAAGAACCCAATGGGATTCCATGATATTGAGCACGAAGAGGGGATAGAACAGCAAAGGCTGGTCACATGGTTGATGGAGAAGATAAACAGTGCTCCTACAAGCAAGTTTTGGATTGAAGAGATGGTAGATCCCAATATGGAAGGTCAATACGACGTCGCAGAAGTTGAGCTGTTGGTTAATGTGGCTTTGCAATGTGTGTTAGATGACATGGACTCAAGACCGACCATGAGCCAAGTTGTGGAGATGCTTCAAGTCCATCAAGAGACAGAGAGAGTTTTCCAATG 2432 0.4223 MHSPTLILLLLSLLLRFSALFSLAATDTLADGSSLCVEEPDDILVSPNGDFHAGFFPVGDNAFGFSIWFNSSKEPTLVWMANRDQPVNGKASTLSLLKNGNLILRDAGRKTIWSSSTSSNSRVQLKLMNNGNLVLRTLQGNILWQSFDSPTDTLLPGQPLTERANLVSSRSKTNYSSGFYRLYFDNDNVLRLLFKGPDVSSVFWPYPWMTPIELQRSTYNISKTAVLDPYGQFNSSDEFSFSSTDYGERIYRRLLVDPDGNIRLYSFNGGTKTWEVSWQAISDPCTVHGICGPNSMCTYHHALGRTCYCLQGHKIKNPNDWTQGCVPEFAIADTTNNHSTDQLRFLQLSSFEFYGYDIGIYRLLNLSECLHMCLEAGDNCKAVQVKVDYEGGNMLCYPKTLLLNGRDAPNFSGHIYLKLPKPIVLSSNKPRKYLPLNCSVASFRQLNTTFEKSSTNTSLNILLWFASGIGALELTCIFLVWFCLFRSSKQAGTLTGESRQLLSATGFQRFTYEELKRATRGFTEEIGRGSGGIVYKGILDDDRVAAIKRLSSDSNQGEAEFLAEISTIGMVNHMNLIDMWGYCVHGKDRLLVYEYMEHGSLAENLSSSVLDWNKRFNIAGGTAKGLAYLHEECLEWVLHCDVKPQNILLNNNFQPKVADFGLSKLLNRNESNTNSKFSKVRGTRGYMVPEWVYNFHITSKVDVYSYGIVVLEMITGKNPMGFHDIEHEEGIEQQRLVTWLMEKINSAPTSKFWIEEMVDPNMEGQYDVAEVELLVNVALQCVLDDMDSRPTMSQVVEMLQVHQETERVFQ 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00680 810 SMART serkin_6 520 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00680 810 SMART blect_4 26 150 IPR001480 -
Bva10g00680 810 PANTHER OS07G0415500 PROTEIN 8 803 - -
Bva10g00680 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 206 IPR036426 -
Bva10g00680 810 CDD B_lectin 44 150 IPR001480 -
Bva10g00680 810 SUPERFAMILY Protein kinase-like (PK-like) 500 801 IPR011009 -
Bva10g00680 810 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Bva10g00680 810 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 8 803 - -
Bva10g00680 810 Gene3D Transferase(Phosphotransferase) domain 1 596 809 - -
Bva10g00680 810 Pfam D-mannose binding lectin 76 163 IPR001480 -
Bva10g00680 810 ProSiteProfiles Protein kinase domain profile. 520 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00680 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Bva10g00680 810 Gene3D - 21 149 IPR036426 -
Bva10g00680 810 PIRSF SRK 1 809 IPR024171 GO:0004674
Bva10g00680 810 Pfam S-locus glycoprotein domain 234 316 IPR000858 GO:0048544
Bva10g00680 810 Gene3D Phosphorylase Kinase; domain 1 487 595 - -
Bva10g00680 810 Pfam Protein kinase domain 523 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00680 810 ProSiteProfiles Bulb-type lectin domain profile. 20 148 IPR001480 -
Bva10g00680 810 CDD STKc_IRAK 526 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00680 Bva-Chr10 5728061 5730493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00680 487 795 Trihelix Transcription Factor Family AT1G68690 40.000 4.41e-64 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva10g00680 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00680 - - gmx:100816469 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00680 10 5728061 5730493 Bva10g00680 10 5728061 5730493 ECH