Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00668 ATGGAAGACAAAGAGAACTCCGTCCCTGAGCGTCTTACGCGTGCAGCCAAAAAGAGGGCCGCAGCTGCCATTGCCGATCTCCATGCCCCCACCAAGAAGCGTGTGGTGTTGGGGGAGCTTCCCGACTTGTCAAATGCTCTTGTTAGGAAGAAACCAGACTATGGAGCAGAGACCCAAAAGGAGAAAGGTGGAACGAAGAGAAAGGTCAGGAAAGTTCTACCCACTACGACAGCGAAGACACCGGCCAAGTCAGGTGATGGGgaggtaaagttggatgatcctcAAATGTGCGAGACTTATGTTTCCGACATTTATGACTATCTTCGAACAATGGAGGTGGATCCAAGGAGAAGATCATTGCCTGATTACATGCAGAGGGTTCAGAAGGATGTTAATGCTAATATGCGAGCTATTCTGGTGGATTGGTTAGTTGAGGTTGCTGAGGAACACAAGCTTGTTTCAGATACTCTatatctttctatttctttggtCGATAGATATTTATCTTTGAATGCTCTAAATAAGCAGAAGTTACAGTTACTGGGCGTTTCTTCGATGCTAATTGCCTCAAAATACGAGGAAATCAAACCTCCAGAAGTAgaagaattttgttatattacgGATAACACATACACTAAGGAAGAGGTTGTAAAGATGGAAGCTGATATACTGAAATCCTTGAGGTTTGAATTGGGAAACCCTACGGTAAAGACATTTTTAAGAAGATTCTCCAGAATTGCTCAAGAGAATTATGAATCTTCTGGCCTGCAGTTTGAGTTTCTGAGCTACTACCTTGCAGAGCTCAGTTTGTTGGATTATAATTGTGTTAAGTTTTTGCCTTCTTTGGTGGCCGCATCAGTTATATTTCTCGTCAGGTTTATGTTAAACCCGAATGTTCATCCTTGGAATTCAACCCTCCATCAGCACTCTGGCTATGAACCAGCGAACTTGAAGGAATGTGTCCTACTCATACATGATTTGTATCTCAGAAGGAGAGGGGGGTCTTTGCTAGccgtaaaagaaaaatacaagcaGCATAAGTTCAAATGTGTCGCCACAATGCCTTCTCCTCCAGAGATTCCGCTTTCTTATTTTGAAGATCAGAGTTCAGATCTTTA 1118 0.4043 MEDKENSVPERLTRAAKKRAAAAIADLHAPTKKRVVLGELPDLSNALVRKKPDYGAETQKEKGGTKRKVRKVLPTTTAKTPAKSGDGEVKLDDPQMCETYVSDIYDYLRTMEVDPRRRSLPDYMQRVQKDVNANMRAILVDWLVEVAEEHKLVSDTLYLSISLVDRYLSLNALNKQKLQLLGVSSMLIASKYEEIKPPEVEEFCYITDNTYTKEEVVKMEADILKSLRFELGNPTVKTFLRRFSRIAQENYESSGLQFEFLSYYLAELSLLDYNCVKFLPSLVAASVIFLVRFMLNPNVHPWNSTLHQHSGYEPANLKECVLLIHDLYLRRRGGSLLAVKEKYKQHKFKCVATMPSPPEIPLSYFEDQSSDL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00668 372 Gene3D - 103 353 - -
Bva10g00668 372 CDD CYCLIN 135 224 IPR013763 -
Bva10g00668 372 PANTHER CYCLINS 24 368 IPR039361 -
Bva10g00668 372 SMART Cyclin_C_2 234 357 IPR004367 -
Bva10g00668 372 CDD CYCLIN 234 325 IPR013763 -
Bva10g00668 372 PANTHER CYCLIN-A3-1-RELATED 24 368 - -
Bva10g00668 372 Gene3D - 117 232 - -
Bva10g00668 372 SUPERFAMILY Cyclin-like 234 359 IPR036915 -
Bva10g00668 372 SMART cyclin_7 238 326 IPR013763 -
Bva10g00668 372 SMART cyclin_7 141 225 IPR013763 -
Bva10g00668 372 Pfam Cyclin, N-terminal domain 103 231 IPR006671 -
Bva10g00668 372 Pfam Cyclin, C-terminal domain 234 357 IPR004367 -
Bva10g00668 372 SUPERFAMILY Cyclin-like 92 231 IPR036915 -
Bva10g00668 372 ProSitePatterns Cyclins signature. 136 167 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00668 Bva-Chr10 5678343 5681115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00668 5 367 Core Cell Cycle Gene Families AT1G47230 59.783 8.42e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00668 K06627 - pvy:116125667 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00668 10 5678343 5681115 Bva06g02130 06 14066975 14069485 BWGD