Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00659 ATGGATGAAGGAGAGCAACTCTGCGAGGCGGCGAGGAACGGCGACGCCGACAaggtgaaaattttgatagaCTCCGGAGCCGACGTAAGGTTCTTTGACGGCGACGGTCTTACTCCTCTGATGCACGCGGCAAAGCTAGGCCACGCCGAAGTGGTGAAGATACTTCTCTCTGCTGGTGCTCCCTGGAACGCTCTTTCTCCATCCAACGTCTCCGCCGGGGACTTTGCCATGGAGGCAGGTCACCAGGAAGCGTTCGAGGTCCTCCTCAATGCCGGAATTCAAGCTGAGTTGGTTCTCAGTACAATCGCGAggaaaacaagtaaaaatgaCAATTCTGGTAAAGATTATTTAGAGGATAGGGTAAGTTTTAGTGAAGATAAGTTGATGGACTCTGATAGCAAAGCTGTCATGATGGCCTGGGAGAAGCCTTTGATGGAAGCTCATGCTAAAGCTGTTTGCTCGGGTGGTGGTCACATTCTGAATATTGGATTTGGGATGGGTCTTGTGGATACAGCTATTCAGCAATATAAACCTGTGATGCACACCATTGTTGAGGCTCATCCAGAGGTTTATCAACGTATGCTTCGCACAGGTTGGGGTGAGAAGGATAACGTAAAGATAGTTTTTGGCCGATGGCAAGATGTTCTGCCGCAGCTTGAATCATACGATGGCATTTTCTTTGACACCTATGGCGAATACTATGAAGACCTAAGAGAGTTCCATCAACATCTTCCTGCACTACTGAAACCTAGTGGAATCTACTCTTTCTTCAATGGCCTATGTGGAAGTAATGCATTTTTCCATGTTGTTTACTGCCATTTGGTATCTCTTGAACTTGAGAAATTGGGTTATTCCACGCAATTAATCCCATTGCCTGTTAAGGATTGTTTGGgagaagaagtttgggaaggTGTGAAACACAGATATTGGCAACTTGATACATATTACCTTCCTGTTTGTCAGTCTGAAGAGGATTCTGAATG 983 0.4405 MDEGEQLCEAARNGDADKVKILIDSGADVRFFDGDGLTPLMHAAKLGHAEVVKILLSAGAPWNALSPSNVSAGDFAMEAGHQEAFEVLLNAGIQAELVLSTIARKTSKNDNSGKDYLEDRVSFSEDKLMDSDSKAVMMAWEKPLMEAHAKAVCSGGGHILNIGFGMGLVDTAIQQYKPVMHTIVEAHPEVYQRMLRTGWGEKDNVKIVFGRWQDVLPQLESYDGIFFDTYGEYYEDLREFHQHLPALLKPSGIYSFFNGLCGSNAFFHVVYCHLVSLELEKLGYSTQLIPLPVKDCLGEEVWEGVKHRYWQLDTYYLPVCQSEEDSE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00659 327 Gene3D - 1 92 IPR036770 -
Bva10g00659 327 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 4 323 - -
Bva10g00659 327 ProSiteProfiles Ankyrin repeat profile. 35 67 IPR002110 GO:0005515
Bva10g00659 327 Gene3D Vaccinia Virus protein VP39 101 322 IPR029063 -
Bva10g00659 327 ProSiteProfiles Ankyrin repeat region circular profile. 35 60 - -
Bva10g00659 327 PIRSF Rmt2 1 114 IPR017408 GO:0016274
Bva10g00659 327 PIRSF Rmt2 103 324 IPR017408 GO:0016274
Bva10g00659 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 320 IPR029063 -
Bva10g00659 327 Pfam Ankyrin repeats (3 copies) 7 94 IPR002110 GO:0005515
Bva10g00659 327 SMART ANK_2a 68 97 IPR002110 GO:0005515
Bva10g00659 327 SMART ANK_2a 2 31 IPR002110 GO:0005515
Bva10g00659 327 SMART ANK_2a 35 64 IPR002110 GO:0005515
Bva10g00659 327 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 106 327 IPR026480 -
Bva10g00659 327 SUPERFAMILY Ankyrin repeat 7 95 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00659 Bva-Chr10 5649952 5651751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00659 1 101 MAP Kinase Kinase Kinase AT2G31800 34.653 6.03e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00659 K18477 - vvi:100259168 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00659 10 5649952 5651751 Bva10g00659 10 5649952 5651751 ECH