Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00641 ATGGAGAGCTACCTGAATGAGAATTTCGGAGATGTGAAACCAAAGAACTCCTCGGAGGAGGCGCTTCGGAGATGGAGAAAGCTCTGTTGGCTTGTGAAGAATCCTAAAAGGAGGTTTCGCTTCACTGCTAATCTCTCTAAGCGATTTGAAGCTGAGGCCATCAGACGCTCAAATCAgGAGAAGTTCAGAGTTGCAGTGTTGGTCTCCCAAGCTGCACTTCAGTTTATACATGGTCTAAATTTGTCAAGTGAATATACTGTACCAGAAGAAGTTAAAGCTGcgggttttgaaatttgtgcCGATGAGTTGGGATCTATTGTTGAAGGCCGTGATGTGAAGAAGTTGAAAATTCATGACGGGGTTGAGGCTTGCTTATGTGGGAAGATTAAGGAAGTAGGAAGCTCTAAGATCTCTTCCGATTTCTCATCTGATCTTCCGGAGTCTGCTGTTAGAATTCTACTCCAATCAATATTTAACAATACTGGAGGAGAAGTTGTCAGAAACAAGGATGATAAGATTGAAATCCTGGGAACACCAACTGAGACTGCTCTCTTGGAATTTGGGCTATCACTTGGTGGTGATTTCCAGGAAGAACGACTTGCGTCGAAAGTTGTGCAAGTTGAACCCTTCAATTCTTTAAAGAAGCGCATGGGCGTGGTTCTACTGTTTCCTGATGGTAGCTTCAGGGCACACTGCAAAGGCGCCTCTGAAATAATTCTAGCTGCATGTGACAAAGTTATAGACTCAAAGGGAGAGGTTGTTCCCCTTCACGAAGAATCcatcaattatttgaaaaatacaattgaaaattttgccaGCGAAGCTCTCCGTACACTTTGCCTTGCTTATATGGAGATTGGAAGCGAATACTCTGTTGAAAGTCCTATTCCCATTACGGGTTACACATGTATAGGAATTGTAGGTATTAAAGATCCAGTTCGTCCTGGTGTTCGAGAGTCTGTTGCCATTTGTAAGTCCGCTGGTATTACTGTAAGAATGGTTACTGGAGACAACATAAATACTGCAAAGGCAATTGCTAGGGAATGTGGAATTCTTACCGAGGGTATAGCAATTGAAGGCCCTGAGTTCCGTGAGAAGACTGAGGAGGAATTGCTCGATATAATTCCAAAAATCCAGGTGATGGCACGATCTGCACCAATGGATAAGCATACACTTGTGAAACACTTAAGGACAACATTTGAAGACGTTGTTGCAGTTACTGGTGATGGTACAAATGATGCCCCAGCACTTCATGAAGCAGATATTGGACTTGCAATGGCCATTGCTGGAACGGAGGTAGCAAAGGAAAGTGCTGATGTGATAATATTAGATGATAACTTTTCCACTATTGTTACAGTGGCCAAATGGGGCCGTTCAGTGtacataaatatacaaaaattcgTGCAGTTTCAGCTTACAGTGAATATTGTTGCTCTGATTGTTAACTTCTCTTCTGCCTGTTTAACTGGAAATGCTCCTCTCACAGCAGTTCAGCTTCTATGGGTCAACATGATCATGGACACTCTGGGAGCACTTGCACTGGCCACTGAACCTCCGAATGATGACTTAATGAAAAGACCACCTGTCGGTCGGAAAGGAAATTTTATCAGTAACGTGATGTGGAGGAATATCTTGGGGCAGTCTCTATATCAGTTTGTCATAATCTGGTTCCTCCAGACTAGAGGAAAAGTAGCTTTCCATCTTGATGAGCCAGATTCCGATCTAGTATTGAATACACTCATATTCAATTCATTCGTATTTTGTCAGgTTTTCAATGAGATCAGTTCCAGAGAGATGGAAAAGGTAAATGTTTTCGAAGGTATACTGAAGAACTATGTCTTTGTGGCTGTCCTAACCTGCACCATCCTCTTCCAAATCATAATTATTGAATACGTGGGCACCTATGCAAATACACATCCCCTCAGTTTGAAGCAGTGGTTTGGTAGTGTTTTCCTTGGATTCCTAGGCATGCCAATTGCAGCAGCTTTAAAGTTGATTCCTGTGGGATCTTCCTG 2015 0.4134 MESYLNENFGDVKPKNSSEEALRRWRKLCWLVKNPKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVKAAGFEICADELGSIVEGRDVKKLKIHDGVEACLCGKIKEVGSSKISSDFSSDLPESAVRILLQSIFNNTGGEVVRNKDDKIEILGTPTETALLEFGLSLGGDFQEERLASKVVQVEPFNSLKKRMGVVLLFPDGSFRAHCKGASEIILAACDKVIDSKGEVVPLHEESINYLKNTIENFASEALRTLCLAYMEIGSEYSVESPIPITGYTCIGIVGIKDPVRPGVRESVAICKSAGITVRMVTGDNINTAKAIARECGILTEGIAIEGPEFREKTEEELLDIIPKIQVMARSAPMDKHTLVKHLRTTFEDVVAVTGDGTNDAPALHEADIGLAMAIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRPPVGRKGNFISNVMWRNILGQSLYQFVIIWFLQTRGKVAFHLDEPDSDLVLNTLIFNSFVFCQVFNEISSREMEKVNVFEGILKNYVFVAVLTCTILFQIIIIEYVGTYANTHPLSLKQWFGSVFLGFLGMPIAAALKLIPVGSS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00641 671 PANTHER CATION TRANSPORTING ATPASE 3 122 - -
Bva10g00641 671 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 137 317 IPR023299 GO:0000166
Bva10g00641 671 Gene3D - 424 669 - -
Bva10g00641 671 PANTHER CALCIUM-TRANSPORTING ATPASE 121 668 - -
Bva10g00641 671 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Bva10g00641 671 Gene3D - 17 77 - -
Bva10g00641 671 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 151 668 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva10g00641 671 PRINTS P-type cation-transporting ATPase superfamily signature 431 443 - -
Bva10g00641 671 PRINTS P-type cation-transporting ATPase superfamily signature 327 337 - -
Bva10g00641 671 PRINTS P-type cation-transporting ATPase superfamily signature 407 426 - -
Bva10g00641 671 PRINTS P-type cation-transporting ATPase superfamily signature 99 113 - -
Bva10g00641 671 PRINTS P-type cation-transporting ATPase superfamily signature 305 316 - -
Bva10g00641 671 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 353 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00641 671 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 376 488 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00641 671 SUPERFAMILY Calcium ATPase, transmembrane domain M 457 667 IPR023298 -
Bva10g00641 671 Pfam haloacid dehalogenase-like hydrolase 304 421 - -
Bva10g00641 671 SUPERFAMILY HAD-like 265 512 IPR036412 -
Bva10g00641 671 Gene3D - 312 423 IPR023214 -
Bva10g00641 671 PANTHER CALCIUM-TRANSPORTING ATPASE 3 122 - -
Bva10g00641 671 Gene3D - 121 311 IPR023299 GO:0000166
Bva10g00641 671 PANTHER CATION TRANSPORTING ATPASE 121 668 - -
Bva10g00641 671 PRINTS H+-transporting ATPase (proton pump) signature 439 464 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00641 671 PRINTS H+-transporting ATPase (proton pump) signature 407 423 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00641 671 PRINTS H+-transporting ATPase (proton pump) signature 264 282 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00641 671 Pfam Cation transport ATPase (P-type) 167 246 - -
Bva10g00641 671 Pfam Cation transporting ATPase, C-terminus 492 666 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00641 Bva-Chr10 5569686 5576219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00641 90 670 Primary Pumps ATPases AT1G27770 77.148 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00641 K01537 - gmx:100810758 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00641 10 5569686 5576219 Bva10g00641 10 5569686 5576219 ECH