Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00615 aTGGATCTTGGTGCGATTAGTTTAGATGGGTTGGTGGATTCCGAAACTGGGTTTGCCCCTCTTGCTTCAGATCCTGAAACAAAGCAGAAATTGTACGGATCTGGGTTCCTTAAGCAGGAGAGATCTGGCAACGTTGAAGATGACTGGAGAAGCTCCAAACTTGCCAAGACTGATGATGTTTCTGCTGCTTCCAAAGCAATGCTGCTTCACCACAGAAACTCTCTGTTGAGATCTTCTAATGCCACTCTCTTTTCTGATTCCCAGCAGCACCAACCCCAAATGCTCAGCTTCTCTTCTCCAAAATCAGAACCTCTCTTCCTGGATAAAATCTCCAACTCCACAAATGCCACATTGCCTTACTCTTACCATCCCTTATCTAGTTACAGCAGAGATACAGGTTACAGTTCTGGAAGCATGCATGGGGTTTTTACGGGTACCAGAGGGCCATTCACTCCGTCACAGTGGATGGAACTGCAGCACCAGGCCCTGATCTACAAGTGCTTAGCCGCAAATGTGCCTGTACCTTCTCATCTGCTTATCCCCATCAGAAAAGCGCTTGATTCTGCTGGCTTCTGTAACTATTCAACCGGACTTCTCAGACCTAATACATTGGGTTGGGGGGCTTTCCATCTGGGATTCTCGAACAACACCGATCCTGAGCCAGGGAGGTGTCGTAGGACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTGGTTGACCAGAAGTATTGTGAGCGGCACATGAACAGAGGACGCCACCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCACCGGgaccaccaccaccactgcTACAACTACTACTGCAGCCGGCAACGCTGCTTCTAATCTCATCTCTAATAATGCTTCTTCCACCGCTGCATCCAACAGCCTTACCTTTACACATCAAGATGCCAAAAATTTGCACCCTCTTGCGTCTAATGCTTCTGCGGCTGCTAACACCATCAACAGGATGTTTATGAATAATAAGGAAAATGCTAGTGAGAGAATACAGGACGCTACAACCCTGCCAATGCTGCCTCCCTCTCTTGAGCTGAAACCAAAAGAGAACCCCTTTATGATTCAAAAGCACCAAATCCCATTTGAGGAATCCTCAAGGAATGAGTTTGGGCTTGTCACCGGTGACTCCCTTCTTAACCCTTCACAGAAAAGTTCTAGCTTGTTGAGTAGCAGAAGCTTTGGTTCTACACATAAACCTGCTGACCGTGAAACAGAATCGCAACAATCCCTTAGGCATTTCATCGATGactggcccaagaatcattccGATCGCTCTAGTGTTTCATGGCCTGAACTTGACATGCAATCTGAGAGAACCCAATTGTCAATTTCCATTCCCTCGGACTTCATGTCGTCCACTTCCTCTCCCGCCAATGAGAAAGTCACATTGTCACCTCTTCGATTATCATCGAGGGAATTAGATCCAATACAAATGGGTTTGGGAGTTGGAAGTACTGTTAATGAATCAAATACGAGGCAGGGAAATTGGATTCCAATTACATGGGAGAGTTCTATGGGTGGTCCTCTTGGGGAGGTTCTGAATCTTAGCAATAACAATTCAACTGAGTGTAGCACTTCCGCTCTCAACCTTATGAGTGATGGTTGGGACAATAGTCCTCCATTAGGGTCCTCTCCTAGAGGGGTTTTGCAGAAGACCGCGTTTGGTTCTCTTTCAAATAGCAGTGCTGGGAGCAGTCCAAGGGCAGAGAATAAGAGCAATGACCTCCTAGGGTCCACTCTTGCCAATTCTACCTCCTTCCCTGCCTTGTA 1805 0.4626 MDLGAISLDGLVDSETGFAPLASDPETKQKLYGSGFLKQERSGNVEDDWRSSKLAKTDDVSAASKAMLLHHRNSLLRSSNATLFSDSQQHQPQMLSFSSPKSEPLFLDKISNSTNATLPYSYHPLSSYSRDTGYSSGSMHGVFTGTRGPFTPSQWMELQHQALIYKCLAANVPVPSHLLIPIRKALDSAGFCNYSTGLLRPNTLGWGAFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVTGTTTTTATTTTAAGNAASNLISNNASSTAASNSLTFTHQDAKNLHPLASNASAAANTINRMFMNNKENASERIQDATTLPMLPPSLELKPKENPFMIQKHQIPFEESSRNEFGLVTGDSLLNPSQKSSSLLSSRSFGSTHKPADRETESQQSLRHFIDDWPKNHSDRSSVSWPELDMQSERTQLSISIPSDFMSSTSSPANEKVTLSPLRLSSRELDPIQMGLGVGSTVNESNTRQGNWIPITWESSMGGPLGEVLNLSNNNSTECSTSALNLMSDGWDNSPPLGSSPRGVLQKTAFGSLSNSSAGSSPRAENKSNDLLGSTLANSTSFPAL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00615 601 MobiDBLite consensus disorder prediction 392 407 - -
Bva10g00615 601 ProSiteProfiles WRC domain profile. 218 262 IPR014977 -
Bva10g00615 601 ProSiteProfiles QLQ domain profile. 149 184 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva10g00615 601 PANTHER GROWTH-REGULATING FACTOR 9 23 587 - -
Bva10g00615 601 Pfam QLQ 149 183 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva10g00615 601 MobiDBLite consensus disorder prediction 247 274 - -
Bva10g00615 601 MobiDBLite consensus disorder prediction 392 420 - -
Bva10g00615 601 Pfam WRC 219 261 IPR014977 -
Bva10g00615 601 SMART QLQ_2 148 184 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva10g00615 601 PANTHER - 23 587 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva10g00615 601 MobiDBLite consensus disorder prediction 546 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00615 Bva-Chr10 5447400 5450714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00615 29 567 GRF Transcription Factor Family AT2G22840 42.679 3.38e-105 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva10g00615 WRC 5.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00615 - - aprc:113865097 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00615 10 5447400 5450714 Bva10g00615 10 5447400 5450714 ECH