Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00600 ATGGGTTTTGCTGATATCTGTGATCTGGGTCTTGGAATTGGCCCCCAAAAGATTTGCATGAAGACCGATCATCGAGAATTtagcaagaagaagaagaagcaagatCAGGATCCATTGATTTGCAATACTAAAAATGAGCTATATCCATCTCTTACGTTAGGACTACCAGCTGATCATGATGAGGCGTATCAAGTAGCAGCAACAAAGGCTGAATCTGCTGATTTTCATGCACGAGGCTATTCTGATAAACCTAGTgcagtttcttcattttcaaactCTTCTAGCATCAAGAGGGAGAGAGATCAGTTTGTGAGTGAAGAAGTTGACCATGAGCTTGAGGTAGACAAGTTTCCTTCAAGAATTACTGATTTAGATGAAGATGGAAATCCTAGGAAGAAACTTAGGCTTACCAAAGAACAATCCGCACTTCTAGAAGACAGCTTCAAAGAGCATTCTACTCTCAATCcgAAGCAAAAGCAAGAATTGGCTAGGAAGCTGAAACTACGGACTAGACAAGTAGAGGTGTGGTTTCAAAACAGGAGAGCCAGgACAAAGATGAAGCAAACTGAAATGGATTgtgaattattgaagaagTGCTGCGAAACGCTGACAGAAGATAACAAGAGACTGGAAAAAGAACTACAAGAGCTGAAATCAACGATGGGACCCTTTCTTATGCAACTTCCAGCAGCTACCCTCACCCTATGCCCCTCTTGTGAGAGAATTTGCAGTGGTGGCTCCGCCGGGAACGGCAATGGCTCTTCTGCAACGGCGCCTTACTTTATTGGCTCAAAGGTCCATAACTTccataaaagtaattattccTTCACGCACCCATCTGCAGCTTGTTA 851 0.3937 MGFADICDLGLGIGPQKICMKTDHREFSKKKKKQDQDPLICNTKNELYPSLTLGLPADHDEAYQVAATKAESADFHARGYSDKPSAVSSFSNSSSIKRERDQFVSEEVDHELEVDKFPSRITDLDEDGNPRKKLRLTKEQSALLEDSFKEHSTLNPKQKQELARKLKLRTRQVEVWFQNRRARTKMKQTEMDCELLKKCCETLTEDNKRLEKELQELKSTMGPFLMQLPAATLTLCPSCERICSGGSAGNGNGSSATAPYFIGSKVHNFHKSNYSFTHPSAAC 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00600 283 Pfam Homeodomain 131 185 IPR001356 GO:0003677
Bva10g00600 283 ProSiteProfiles 'Homeobox' domain profile. 127 187 IPR001356 GO:0003677
Bva10g00600 283 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 8 282 - -
Bva10g00600 283 SUPERFAMILY Homeodomain-like 128 195 IPR009057 -
Bva10g00600 283 ProSitePatterns 'Homeobox' domain signature. 162 185 IPR017970 GO:0000981|GO:0006355
Bva10g00600 283 SMART halz 187 228 IPR003106 GO:0006355|GO:0043565
Bva10g00600 283 Coils Coil 193 220 - -
Bva10g00600 283 Gene3D - 125 192 - -
Bva10g00600 283 PANTHER - 8 282 - -
Bva10g00600 283 Pfam Homeobox associated leucine zipper 187 221 IPR003106 GO:0006355|GO:0043565
Bva10g00600 283 CDD homeodomain 130 185 IPR001356 GO:0003677
Bva10g00600 283 SMART HOX_1 129 191 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00600 Bva-Chr10 5334172 5335817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00600 1 283 Homeobox Transcription Factor Family AT2G22800 48.684 2.45e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva10g00600 Homeodomain 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00600 K09338 - gmx:100807072 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00600 10 5334172 5335817 Bva10g00600 10 5334172 5335817 ECH