Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00585 ATGGGTATCTGCATATCCGTCGGATATTCAGATATTCATGAGGCACCTGATGAAGTACACGAGAACgtaataatatttgaagcaAATAAGGTTGCAAATGGAACAACTCGTAGACTTGGCTCTGTTTACTCTAAACAAGGTAGCAAAGGACTAAACCAAGATGCTGCCACACTTTACCAGGGCTATGGAATGGAAGGTGGAGTATTTTGTGGTGTTTTTGATGGGCATGGAAGGAACGGTCACGTAGTGAGCAAAATGGTGAACGGTCGTCTGTCTTCCCTGTTACTGAGCCAAAAGAATGCTCTTGCAAATGGTAATGGTATCCAAAACCATGTCAACACAGAGGATGATCATTCTGCAACAAACCAGAATTTCCAGAACTGGAAAGAAGCTATCGTTAGTGGCTTCAAAGTGATGGACAAGGAAGTAAAGCTACAAGATAATCTAGATTGCTTTAGCAGCGGAACTACAGCTGTAGTTGTCTTAAAACAGGGTGAAGATCTTGTAATAGCTAATCTGGGTGACTCAAGGGCAATCCTCGGAACAATCTGTGATGGTGAAATCTCAGCCATTCAATTGACTGAGGATTTGAAGCCTGGACTACCCACTGAAGCAGATAGAATAAGGAGGTGCAATGGTCGCGTATTTGCTCTAAAAGAACCACACATCCAGCGAGTGTGGTTGCCCAACGAGGATTCCCCAGGTCTTGCCATGTCTCGTGCATTTGGAGATTTCATGCTCAAAGACCACGGCATCATTGCCGTCCCAGATATCTCGTATCATCGTCTGACATCCAATAACCAATTTATTGTCCTTGCATCTGATGGCGTGTGGGATGTACTAAGCAACAATGAGGTTGCTTCAATTGTGTGGACAGCATATAGTGAGGAGGCAGCGGCAAAGGCAGTGGTGGAAGCAGCCACGGCTGAATGGAAAAAGAAGTACCCTTCTTCCAAGGTTGATGACTGCACCGCGGTTTGCCTCTTTTTACACGAGACAAACAGCGCAACGTCATG 1016 0.4459 MGICISVGYSDIHEAPDEVHENVIIFEANKVANGTTRRLGSVYSKQGSKGLNQDAATLYQGYGMEGGVFCGVFDGHGRNGHVVSKMVNGRLSSLLLSQKNALANGNGIQNHVNTEDDHSATNQNFQNWKEAIVSGFKVMDKEVKLQDNLDCFSSGTTAVVVLKQGEDLVIANLGDSRAILGTICDGEISAIQLTEDLKPGLPTEADRIRRCNGRVFALKEPHIQRVWLPNEDSPGLAMSRAFGDFMLKDHGIIAVPDISYHRLTSNNQFIVLASDGVWDVLSNNEVASIVWTAYSEEAAAKAVVEAATAEWKKKYPSSKVDDCTAVCLFLHETNSATS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00585 338 Pfam Protein phosphatase 2C 109 309 IPR001932 -
Bva10g00585 338 SUPERFAMILY PP2C-like 39 332 IPR036457 -
Bva10g00585 338 Gene3D - 23 333 IPR036457 -
Bva10g00585 338 ProSiteProfiles PPM-type phosphatase domain profile. 39 330 IPR001932 -
Bva10g00585 338 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 335 - -
Bva10g00585 338 SMART PP2C_4 32 328 IPR001932 -
Bva10g00585 338 CDD PP2Cc 38 292 IPR001932 -
Bva10g00585 338 PANTHER ALPHABET, ISOFORM E-RELATED 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00585 Bva-Chr10 5238818 5240324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00585 1 331 PP2C-type Phosphatase Gene Family AT5G26010 54.142 9.13e-111 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00585 - - gmx:100795893 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00585 10 5238818 5240324 Bva10g00585 10 5238818 5240324 ECH