Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00566 ATGTCAAGAATGAAGCATCTACTGAGAAAGCTTCACATCGGTGGCGGTATCAACGAACACCAAAGATTGGCTGAGACCGGTCCCGTTCTTAGTCCCACCCCTAATCTCACGTCGTCTTCTTCGACTTTACCGTCCGCGACAATGGACACAATCGCAAAAAATGAATCGGTTCCTGATCGGACGGCTATTGATGTTTCGGGTGGTCTTACCGGTGACAAGGGAGTCGATTTCAATCTTTTGGAGGAGGAGTTTCAGATGCAGTTGGCTTTAGCAATTAGCGCTTCCGATCGTGACGTACGCAAGGACCCCGAGTCTTCTCAGATCGATGCTGCTAAGCAGATGAGCCTTGGCTGTGCATCTTCCGTTACCGACACGGAAGCCCTTGTCCAGTTTCAATCGCTTCGTTATTGGAACTATAATGTTATTGATTATGAAGAGAAGGTGATGGATGGATTTTATGATGTATATAGCATCTCCTCATGTTCGTTTGGACGAGGAAAGATGCCATTGTTGGTGGATCTACAAACAGCATCCTTCTCAGGAAATGCTGATTTTGAAGTGATTTTGGTGAACCGCATAGTTGATATTGATCTGCAGCAGCTTGAGAAGAAAGCCTGTAATTTATACATGGACTGTTGTGTTTCTAAGCAAGGACTTCTAGTGAGTGGCTTACTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGGCCAGTTGGTGATGCTGATGAAATGTTGAAAAGGTGGACCAAGAGGAGTTATGAGTTATGCAATTCTTTAAGCACCATCATTCTTCCGCTCGGATGTCTTGATGTTGGACTTTCTCGTCACCGAGCCCTGCTTTTTAAGGTACTGGCTGATAGGATCAGTGTTCCCTGCATGCTGGTTAAAGGGAGCTATTACACTGGAACTGATGATGGGGCTGTGAATTTGATTAAAGCTGATGATGGAAGtgaatatattattgatcTGATGGGTGCTCCTGGCGCTCTTATTCCCGTTGAGGTACCCAGCAGTCAGCTCCAAAActatagtttttctttaagGGGGTGTGGAGAGGTTGTGGGATTACCTAGCAACACAAATGTGATGCTTGATAATGAAAGTGAAATGGTGGCAGTTTCATCTGATCTTGATAGAATTTCAACAGCGAGCAGGACTCAGtctgaaaaatcaaatataggTTGCCAAACAAAATCTGATGAAAGGAACCAGGTTGGCATGAATCAAAATGAGAGGTTTGGACATGATCTGGGGAATCTTCTTCAGTCACTACACAGATCATGTGAAAGCTCATCGCATCCAGAGGCATCACCTGCAGAAAAGATGCAAGTAAAAAATGTTTCTAAGTATGTCCTCAGTGCAGCAAAAAACCCTGAGTTTGCTCAAAAACTACATGCTGTTCTATTAGAGAGTGGTGCGGTGCCTCCTCCTGATCTCTTTTcagaaataaatacatatgaaGATAAGATTATtggaaaaattgatgatattgtTCAATCTGATAGAGATAACTTGGTACCAAGTAACGAGATGTTCCATAAACCTTCACAGGGGTTGTGCCCTCCCATTGACCTTAGATTATGTCGATCATCTAATTGGTTAGCTCAACAGCAAGCAAACGTGCAGACAGATGTCATCAGACCCTATGCTTCTTCACTTTGTGATATGACTGCTAGCAGTAGAAATAATGAATTAGAGCAAACAGATTCCGTGATTGTAGATGGGGTCCCCTTCAGTCTACTTAAGATGTCTGAAGAGCAATGTCTCGAGTGTTCCGCATCCAAGGCAGCAGCTTCTTACAAAAGACTAATTGGCATTGACTTTATGAATAATGATGACGACGACGAAAATTGTCCTAAGAACATGGTTGGAGTGGcttctaataattttgattctgGGAAAGACACttccattattttaaatgaaatagcTCATAGAGATTTTATCCTTTATGACGGTAAAAGTGAGATGGTTCATCCTGTACTGGGGAAGGGCACAGAATATGAAATCCAATGGGAGGATCTTCGTATTGGTGAACGTATTGGTATTGGTTCTTATGGTGAGGTTTATCATGCTGACTGGAATGGCACTGAAGTTGCTGTAAAGAAGTTTCTGGACCAAGATTTCTCCGGTGATGCATTGGCCCAGTTCAAATCCGAAGTTGAGATCATGTTGAGGATGCGGCATCCTAATGTTGTGCTTTTCATGGGAGCTATTACTCGTCCCCCACATTTCTCTATCCTAACGGAGTTTCTTCCAAGAGGGAGCTTATATAGGCTATTGCATCGTCCCAATTTTCAACTAGATGAGAAAAGGAGGTTGCGTATGGCTCTTGATGTGGCCAAGGGAATGAATTACTTGCACACGAGCCATCCTACTATTGTTCATCGAGATTTAAAGTCTCCAAATCTCCTTGTTGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGTTTGTCCCGCATGAAGCACCATACTTTCCTGTCCTCAAAGTCTACTGCTGGAACGCCAGAGTGGATGGCACCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAATGTGATGTATATAGTTTTGGTATTATTCTATGGGAGTTGGCTACCTTAAGGATCCCATGGAAAGGCTTGAACCCAATGCAGGTCGTTGGAGCAGTTGGCTTCCAAAATAGACGGCTTGAAATTCCAGAAGACGTCAATCCAGTAGTAGCACAGATAATACGCGATTGTTGGCAAACGGAGCCACACTTGCGGCCATCATTCTCACAGCTCATGTCTCGTCTCCTCCATCTACAACATCTGGTTGTTGGAAAAACGAGGCTATTGGAATA 2834 0.4185 MSRMKHLLRKLHIGGGINEHQRLAETGPVLSPTPNLTSSSSTLPSATMDTIAKNESVPDRTAIDVSGGLTGDKGVDFNLLEEEFQMQLALAISASDRDVRKDPESSQIDAAKQMSLGCASSVTDTEALVQFQSLRYWNYNVIDYEEKVMDGFYDVYSISSCSFGRGKMPLLVDLQTASFSGNADFEVILVNRIVDIDLQQLEKKACNLYMDCCVSKQGLLVSGLLQKLADIVVNRMGGPVGDADEMLKRWTKRSYELCNSLSTIILPLGCLDVGLSRHRALLFKVLADRISVPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDLMGAPGALIPVEVPSSQLQNYSFSLRGCGEVVGLPSNTNVMLDNESEMVAVSSDLDRISTASRTQSEKSNIGCQTKSDERNQVGMNQNERFGHDLGNLLQSLHRSCESSSHPEASPAEKMQVKNVSKYVLSAAKNPEFAQKLHAVLLESGAVPPPDLFSEINTYEDKIIGKIDDIVQSDRDNLVPSNEMFHKPSQGLCPPIDLRLCRSSNWLAQQQANVQTDVIRPYASSLCDMTASSRNNELEQTDSVIVDGVPFSLLKMSEEQCLECSASKAAASYKRLIGIDFMNNDDDDENCPKNMVGVASNNFDSGKDTSIILNEIAHRDFILYDGKSEMVHPVLGKGTEYEIQWEDLRIGERIGIGSYGEVYHADWNGTEVAVKKFLDQDFSGDALAQFKSEVEIMLRMRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNFQLDEKRRLRMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGIILWELATLRIPWKGLNPMQVVGAVGFQNRRLEIPEDVNPVVAQIIRDCWQTEPHLRPSFSQLMSRLLHLQHLVVGKTRLLE 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00566 944 SUPERFAMILY Protein kinase-like (PK-like) 664 929 IPR011009 -
Bva10g00566 944 Pfam Ethylene-responsive protein kinase Le-CTR1 130 333 - -
Bva10g00566 944 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Bva10g00566 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Bva10g00566 944 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 69 938 - -
Bva10g00566 944 MobiDBLite consensus disorder prediction 26 45 - -
Bva10g00566 944 Gene3D Transferase(Phosphotransferase) domain 1 756 937 - -
Bva10g00566 944 Gene3D Phosphorylase Kinase; domain 1 670 754 - -
Bva10g00566 944 SMART serkin_6 677 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00566 944 PANTHER SERINE-THREONINE PROTEIN KINASE 69 938 - -
Bva10g00566 944 ProSiteProfiles Protein kinase domain profile. 677 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00566 944 Pfam Protein tyrosine and serine/threonine kinase 677 929 IPR001245 GO:0004672|GO:0006468
Bva10g00566 944 PRINTS Tyrosine kinase catalytic domain signature 751 764 IPR001245 GO:0004672|GO:0006468
Bva10g00566 944 PRINTS Tyrosine kinase catalytic domain signature 790 808 IPR001245 GO:0004672|GO:0006468
Bva10g00566 944 PRINTS Tyrosine kinase catalytic domain signature 837 847 IPR001245 GO:0004672|GO:0006468
Bva10g00566 944 PRINTS Tyrosine kinase catalytic domain signature 900 922 IPR001245 GO:0004672|GO:0006468
Bva10g00566 944 PRINTS Tyrosine kinase catalytic domain signature 856 878 IPR001245 GO:0004672|GO:0006468
Bva10g00566 944 CDD STKc_MAP3K-like 683 929 - -
Bva10g00566 944 MobiDBLite consensus disorder prediction 28 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00566 Bva-Chr10 5154828 5162451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00566 568 935 MAP Kinase Kinase Kinase AT5G11850 70.190 1.66e-179 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva10g00566 PK_Tyr_Ser-Thr 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00566 K04424 - gmx:100779790 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00566 10 5154828 5162451 Bva10g00566 10 5154828 5162451 ECH