Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00563 ATGTTTCCGATTGAGGATCTTTGCCCGCTGCTCAACCTCGAGCGTCTCCTTGATAAATCTCCTATTTACTCGGTTTTCCAGTCCGTATCTGAATCCATGACAAACTCGAATTGCGGAGGCGCCGAGTTAGAGCTGTGCCGAAATGAGTCGTCTGCGTTCATTCTCAAGTTTGTGGCAATGGCAACAATACTCCTCGCCGGCATGACTGGAATTGCCATACCGTTGATTGGTAAGCATCGCCGGTTTCTGCGCACTGACAGTAGCTTGTTCGTGGCTGCCAAGGCTTTCGCCGCAGGAGTCATTCTGGCGACAGGCTTCGTCCACATGTTGTCGGATGCTTCGGATGCACTAACGGATTCGTGCTTGCCTAAATACCCATGGTCAAAGTTCCCTTTTACCGGTTTCTTCGCGATGATGTCCGCGCTTCTAACTCTGCTTATTGACTTTGTGGGAACTCAATATTATGAGCGAAAACAGGGACTGGCTCGAGCGAGTGATGAACAGGTGCGGGTCGGGACATTGGAATCGGGAACAGTGGACGTTCCGGCAGTGAAGGATTTGCATGGGAAAGTGTTTGGGGAAGAGGAAAGCGGTGGAATGCACATTGTGGGAATGCGTGCACATGCAGCGCACCATAGACACAACCACCCTCATGGGCAGGACTCGTGTCATGGCGGCTTCAAGGGACCCTCTTCCTCTCACAGCCACTCCCACTCCCACTCCCACTCTCACGCATTAGGAGATGATGATGGAGATAGTGCCATTCGCCACGTTGTAGTTTCACAGGTATTGGAACTGGGTATTGTATCACATTCGGTAATAATCGGGCTATCTCTGGGAGTTTCTGAAAGCCCATGTACGATAAGGCCTCTAATAGCGGCATTATCGTTCCATCAATTCTTTGAAGGATTCGCACTGGGAGGGTGCATCTCCCAAGCTCAATTCAAGAGTTCATCAGCAACAATAATGGCTTGCTTTTTTGCTCTGACAACGCCGGTGGGTATTGGCGTCGGGACTGGCATTGCCTCTTTTTACAACCCATACAGCCAGGGTGCACTTATCACCGAAGGCATTTTGGACGCCCTATCAGCCGGAATTTTAGTGTACATGGCTTTAGTAGACTTAATAGCCGCTGATTTTCTTAGTAAGAGGATGAGCTGCAACTTTAGGCTGCAAATAGCTTCTTATTGTATGCTTTTCCTCGGGGCTGGATTGATGTCTTTGCTCGCAATCTGGGCTTG 1241 0.498 MFPIEDLCPLLNLERLLDKSPIYSVFQSVSESMTNSNCGGAELELCRNESSAFILKFVAMATILLAGMTGIAIPLIGKHRRFLRTDSSLFVAAKAFAAGVILATGFVHMLSDASDALTDSCLPKYPWSKFPFTGFFAMMSALLTLLIDFVGTQYYERKQGLARASDEQVRVGTLESGTVDVPAVKDLHGKVFGEEESGGMHIVGMRAHAAHHRHNHPHGQDSCHGGFKGPSSSHSHSHSHSHSHALGDDDGDSAIRHVVVSQVLELGIVSHSVIIGLSLGVSESPCTIRPLIAALSFHQFFEGFALGGCISQAQFKSSSATIMACFFALTTPVGIGVGTGIASFYNPYSQGALITEGILDALSAGILVYMALVDLIAADFLSKRMSCNFRLQIASYCMLFLGAGLMSLLAIWA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00563 413 MobiDBLite consensus disorder prediction 209 248 - -
Bva10g00563 413 PANTHER ZINC/IRON TRANSPORTER 33 413 - -
Bva10g00563 413 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 33 413 - -
Bva10g00563 413 Pfam ZIP Zinc transporter 53 410 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bva10g00563 413 TIGRFAM zip: ZIP zinc/iron transport family 41 413 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00563 Bva-Chr10 5138064 5140219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00563 10 413 Inorganic Solute Cotransporters AT1G60960 66.908 1.44e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00563 K14709 - gmx:100812212 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00563 10 5138064 5140219 Bva06g02233 06 14613949 14616086 BWGD