Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00556 ATGGGCGCAGACGACGACGACCCcgaaaaaagaagacaagaaTCATCGAGGGCGTCTTCTTGGGTGACGGATTTTCACCGTGATCTGATGGCTGGGGCGGTGATGGGTGGGGTTGTGCACACAATTGTTGCCCCAATTGAGAGAGCCAAGCTGTTGTTGCAGACTCAAGAAAGCAATCTAGCTATTGTTTCCAGTGGGCGTCGGAAATTCAAGGGCATGGTGGATTGTATAATCCGTACAGTCAGAGAAGAAGGCATTCTCTCTCTGTGGAGAGGCAATGGCAGTAGCGTAATTCGCTATTATCCCTCGGTCGCCCTCAATTTCTCTCTTAAGGATCTTTACAGAAACATGTTAAGAAATGGGAACTCTTACAACAGCAATATTATCTCCAATTTTATTGCTGGGGCTGCAGCCGGTTGTACAACACTTGTGTTGGTGTACCCGCTTGATATTGCACACACCCGTCTGGCTGCTGACATTGGAAGAAGAGATGTGCGCCAATTCAGAGGAATCACCCACTTTCTGGTTACCATATACAGAAAAGATGGGATTAGAGGGATATACAGAGGACTACCTGCCTCTCTACAAGGGATGGTAGTCCACAGGGGACTTTACTTCGGAGGGTTCGACACCATGAAAGAGATATTATCTCAAGATTCAAAACCAGAGTTAGCATTGTGGCAACGTTGGTTAGTAGCCCAGGCAGTGACGACTTCTGCCGGGTTCATATCATATCCATTAGATACAGTTCGAAGGAGAATGATGATGCAGTCTGGGACGGGACAGCCCCTCTACAACAGCACCCTAGATTGCTGGAAGAAGATCTATCTAACAGAGGGGTTCACTTCTTTTTACCGGGGAGCAGTTTCGAATATGTTCAGGAGCACCGGTGCTGCAGCCATCTTAGTCTTGTACGACGAGGTCAAGAAATTCATGAATTGGGGTCGCTTACAGCACTA 959 0.4692 MGADDDDPEKRRQESSRASSWVTDFHRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVSSGRRKFKGMVDCIIRTVREEGILSLWRGNGSSVIRYYPSVALNFSLKDLYRNMLRNGNSYNSNIISNFIAGAAAGCTTLVLVYPLDIAHTRLAADIGRRDVRQFRGITHFLVTIYRKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTMKEILSQDSKPELALWQRWLVAQAVTTSAGFISYPLDTVRRRMMMQSGTGQPLYNSTLDCWKKIYLTEGFTSFYRGAVSNMFRSTGAAAILVLYDEVKKFMNWGRLQH 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00556 319 Gene3D Mitochondrial carrier domain 27 315 IPR023395 -
Bva10g00556 319 PANTHER ADP,ATP CARRIER PROTEIN-RELATED 20 316 - -
Bva10g00556 319 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 20 316 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva10g00556 319 PRINTS Mitochondrial carrier protein signature 188 206 IPR002067 GO:0055085
Bva10g00556 319 PRINTS Mitochondrial carrier protein signature 92 112 IPR002067 GO:0055085
Bva10g00556 319 PRINTS Mitochondrial carrier protein signature 41 55 IPR002067 GO:0055085
Bva10g00556 319 PRINTS Mitochondrial carrier protein signature 28 41 IPR002067 GO:0055085
Bva10g00556 319 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Bva10g00556 319 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Bva10g00556 319 SUPERFAMILY Mitochondrial carrier 24 307 IPR023395 -
Bva10g00556 319 Pfam Mitochondrial carrier protein 25 120 IPR018108 -
Bva10g00556 319 Pfam Mitochondrial carrier protein 224 313 IPR018108 -
Bva10g00556 319 Pfam Mitochondrial carrier protein 127 219 IPR018108 -
Bva10g00556 319 PRINTS Adenine nucleotide translocator signature 229 245 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva10g00556 319 PRINTS Adenine nucleotide translocator signature 25 37 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva10g00556 319 PRINTS Adenine nucleotide translocator signature 70 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva10g00556 319 PRINTS Adenine nucleotide translocator signature 126 139 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva10g00556 319 PRINTS Adenine nucleotide translocator signature 103 115 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bva10g00556 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 215 IPR018108 -
Bva10g00556 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 117 IPR018108 -
Bva10g00556 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 311 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00556 Bva-Chr10 5103581 5106907 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00556 25 314 Antiporters AT5G17400 39.672 7.74e-65 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00556 K05863 - pvy:116143236 525.783