Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00553 atgttGACCGTGGTTTTGGAATTGTTTTCGAGTGTTCCCTTGGTAACATCAATTTTCACGGTGCTGGCGATAATAGGAGGGCTATTGGGTTATCTCTGTGGACCTTATTGGGGGGTGAGGAAGGTTCCAGGCCCACCATCTGTGCCACTCATAGGACACCTTCCTTTGCTAGCTAAGTACGGCCCTGATGTGTTCTCGGTCCTCGCCAAGCAATATGGCCCAATCTACAGATTCCATATGGGAAGACAGCCACTGATAATTATAGCAGATGCAGAGCTCTGTAGAGAGGCTGGgataagaaaattcaaagacATTCCAAACAGAAGCATTCCCTCTCCTATTTCTGCTTCCCCACTTCACCAAAAGGGCCTCTTCTTCACAAGGGATTCGAGATGGTCGACCATGCGAAACACAATATTGTCAATGTATCAGCCATCACATCTTGCCGGCTTAATGCCCACAATGCAATCATTTATAGAAGCTGCTACCCAGAATCTTGACTGCAATGAACAAgacattatattttctaatatctCTCTGAGATTGGCAACTGATGTGATTGGGCAAGCTGCCTTTGGCGTCAACTTTGGCCTCTCTAAACCTCAATCAGCAGGCGATTCGATTAAGAAAGTTGACAAGGTGGAGGGTGTGAGCGATGAAGTATCAGATTTCATCAACCAACACATATACTCCACAACGCAACTTAAGATGGACTTATCAGGTTCCTTCTCCATCATACTGGGTCTACTTGCTCCAGTACTTCAAGAACCATTCAGGCAGATCTTGAAGAGAATACCTGGCACCATGGACTGGAAAATTGAGCGTACTAATCAGAAACTCAGTGGCCGTCTTGATGAGATTGTGGACAAGagaatgaaagaaaggaaCAGAAATTCAAAGGATTTCTTGTCACTGATACTTAATGCCAGAGAATCAAAGGCGGTATCAGAGAATATCTTCACACCTGACTATATCAGTGCTGTTACTTACGAGCATCTTCTTGCTGGGTCTGCAACCACATCTTTCACTTTGTCTTCCATAATGTATTTAGTTGCTGGACATCCCCAAGTTGAGAAAAAGTTGCTCGCAGAGATTGATGAATTTGGCCCAGCTGATAGAATCCCCACCGCTCAAGATCTTCAAGACAAGTTTCCTTATCTGGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTATCCCCGTTAGTTGCAAGAGAAACAGCGAATGAAGTAGAGATAGGCGGTTACGTTCTTCCCAAGGGAACATGGGTCTGGTTGGCACTTGGAGTTCTAGCAAAAGATCCCAAGAACTTCCCGGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGATCCCAAATgtgaagaaatgaaaagaaggcATCCTTATGCATTCATACCATTTGGAATTGGCCCACGGGCATGCATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTCTCTCTCATTCATTTATACGGCAAATATGTCTTTCGCCATTCACCTAACATGGAAAATCCCCTAGAACTCGAATATGGCATAGTTCTCAACTTCAAACATGGTGTCAAACTTAGAGCCATAAAAAGACCATA 1592 0.4234 MLTVVLELFSSVPLVTSIFTVLAIIGGLLGYLCGPYWGVRKVPGPPSVPLIGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCREAGIRKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSMYQPSHLAGLMPTMQSFIEAATQNLDCNEQDIIFSNISLRLATDVIGQAAFGVNFGLSKPQSAGDSIKKVDKVEGVSDEVSDFINQHIYSTTQLKMDLSGSFSIILGLLAPVLQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVDKRMKERNRNSKDFLSLILNARESKAVSENIFTPDYISAVTYEHLLAGSATTSFTLSSIMYLVAGHPQVEKKLLAEIDEFGPADRIPTAQDLQDKFPYLDQVIKEAMRFYTVSPLVARETANEVEIGGYVLPKGTWVWLALGVLAKDPKNFPEPEKFKPERFDPKCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYGKYVFRHSPNMENPLELEYGIVLNFKHGVKLRAIKRP 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00553 530 PANTHER THROMBOXANE-A SYNTHASE 11 529 - -
Bva10g00553 530 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Bva10g00553 530 Gene3D Cytochrome P450 34 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 529 - -
Bva10g00553 530 Pfam Cytochrome P450 43 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva10g00553 530 SUPERFAMILY Cytochrome P450 36 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00553 Bva-Chr10 5090456 5091016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00553 80 529 Cytochrome P450 AT2G26170 75.778 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00553 K20771 - gmx:100797803 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00553 10 5090456 5091016 Bva06g02244 06 14660216 14663000 BWGD