Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00552 ATGGGGGCTTCAGGGAAATGGGTTAAAGCAATAATGGGACTTAAGAAGCCCGACAAGGATGATCACGCGAAGGAGAGTGGTGGTAAGAGTAAGAAGTGGAGGCTATGGCGGAGTTCTTCAGGGGATTCTGGTTCGTGGAAAGGTTTCAAAGGAAACCACAGAGCTGCCTCAGAGGGGTCTGATTCCCCACGCTTACGTGCCCCCGATGCTTTTACTGCTGCCGTTGCCACTCTCGTTCGAGCTCCTCCAAAGGATTTCAGAGCTGTTCGCCAAGAATGGGCTGCCATAAGAATCCAAACTGTCTTTCGGGCTTTCCTGGCAAGGAGGGCTTTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTTCGTGGGAGACAAGTGAGGAAGCAGGCTGCAGTGACATTGAGGTGCATGCAGGCATTGGTTCGTGTTCAGGCTCGTGTAAGGGCTTGTCGTGTGCGAATGTCCATTGAGGGTCAGGCAGTGCAGAACATGCTTAATGAACGTCGAACCAAGGCTAGTCTCTTGAAACAAGCTGAGGAAGGTTGGTGTGATAGCAAAGGAACGCTGGAAGTTGTCAAAGCTAAATTACAGATGAGACAAGAGGGAGCAGTCAAGAGAGAAAGAGCAATTGCATATTCTCTTGCTCACAAGCAATGGAAATCTACACCGAGTTCAAATGCATCGCTCTCATCTCTCAAGAATTATGAGATTGATAAGAATAACTGGGGATGGAATTGGTTGGAACGTTGGATGGCAGCTAAACCCTGGGAAAGTAGATTAATGGAACAATCCCAGAATGATGCCACAGATAAAATCAAAACCCCAGTTCCTCCCAAGAAATTTGTGGATACCATGGCAAgctcaaattcaaaatctttggACCCATGCTTGGTCAAGGTCAGAAATAACAATGTCACCACAAGGATTTCTGCTAGACCTCCCCATATTGGGCAAGCTACTCGCTTATCCTCAAGTCCAAGTTCTGAATTTCGGTATGATGAGAGCTCTGCTTCATCTTCAATCTGCACATCTGCAACACCAATATCTGGGACAGAGGATGGTAGTAACAGTAGGCCCAGTTACATGAATCTAACTGAGTCAaccaaagcaaagcaaaaatCCAATCATCATATGTCCCACAGAGCTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTGCTAAAAGGTTAGCGGCTTTCCCCAATGGAGACTTCAAAAGCGTTGGTGCTtctttaatcaacttttctAGGCCACTTTACCTGCCGACATACCTGGATAAGACGTCAACAAAACCACGGCACGAGGGAGATATACCCAAGTG 1331 0.4568 MGASGKWVKAIMGLKKPDKDDHAKESGGKSKKWRLWRSSSGDSGSWKGFKGNHRAASEGSDSPRLRAPDAFTAAVATLVRAPPKDFRAVRQEWAAIRIQTVFRAFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRACRVRMSIEGQAVQNMLNERRTKASLLKQAEEGWCDSKGTLEVVKAKLQMRQEGAVKRERAIAYSLAHKQWKSTPSSNASLSSLKNYEIDKNNWGWNWLERWMAAKPWESRLMEQSQNDATDKIKTPVPPKKFVDTMASSNSKSLDPCLVKVRNNNVTTRISARPPHIGQATRLSSSPSSEFRYDESSASSSICTSATPISGTEDGSNSRPSYMNLTESTKAKQKSNHHMSHRAQRQQSMDEFQFAKRLAAFPNGDFKSVGASLINFSRPLYLPTYLDKTSTKPRHEGDIPK 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00552 443 MobiDBLite consensus disorder prediction 311 365 - -
Bva10g00552 443 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 434 - -
Bva10g00552 443 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Bva10g00552 443 PANTHER IQ-DOMAIN 5-RELATED 1 434 - -
Bva10g00552 443 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Bva10g00552 443 MobiDBLite consensus disorder prediction 1 64 - -
Bva10g00552 443 MobiDBLite consensus disorder prediction 12 36 - -
Bva10g00552 443 Gene3D - 88 142 - -
Bva10g00552 443 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00552 Bva-Chr10 5085881 5088404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00552 1 430 IQD Protein Family AT2G26180 59.732 6.10e-149 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00552 - - qsu:112015613 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00552 10 5085881 5088404 Bva06g02245 06 14663079 14665175 BWGD