Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00542 ATGGGGTTGGAGTTGGAGTTCCACATCCATCTTCAGAGCAAGAGCACGGAGCAACTTCTTTTGGCAAAGGGCACCGACAGTGGTGTACGACAACTATTGCCGTTGAGAAATTCGATCATGTCTGGCCACCAACCGTTTGATGGAAACGCTCCACCGTTTCAATCCACCTTAGTGGCCGTTGACAAAGACAAGAGCAGTGGTTATGCCTTTCGATGGGCAATTAATCATCTTGATAACCCGGTGGTCGTCTTACTCCATGTTAGGAACAAAAACAATCCACATCAAGGCACAAATGTTTTTCCACCTGACGATAATgatttagttaatattttcattcccTTGCGTGGAGTTTGTCCTCGTAAAGCGGTTCAGATAAAAGAAGCAGTGCTTGATGATAGCGATGTTGCCAGAGGAATTTTGAACTTTGCAAACAAGTATTATGTCCATAGTATCGTTATTGGTGCATCAACGAAGAACTCTCTGTCAAGTTTTcacaagaaattcaaaggTCATGATGCACCAACAACCCTCACGAAAACCATAACGAGGTCGGCCCCAGATTTTAGTTCTGTGTATGTAATTTCAAAAGGGAAGATAATGTCAGCTCGACCAGCACTACGTGCTATGGCTAATTCAGTTACCCCACCAAGACAACCGCCTCCACAGGAACTTATGCATTGTGAATCAGAACTTGTAGTAAGGGCACCTCCAGCTACAAGAGGGGGGAAGAACGAAGAATTAGAAAGGTGGTCTTTGGAAAGAATGAATAATGGAATAAGAACAGCAGTGCGTGAGAGGCCGAGGATTTCTACTAGTGGTATGTCAGTGGATAACATTGATCTATCCGTTCTTAGTCAAAGGTCACCAATTAGCCGTGATTCTCTTTTGGATGAAAGTGACTTCTCAGGGTCACTTGCGTTTGCGTCAATGGACGTGACTAAATCAGATTTGGATTTTAGTATTACATCAGATACTCCCAGGACACCGACAGGTTCTCAATCCACACGAGAAATGGAAGCTGAGATGAAAAGATTAAGGCTTGAACTGAAGCAAACCATGGAAATGTACAGTTCAGCTTGCAAAGAGGCAATCTCAGCTAAAAATGAGGCTAATGAGATTTCTCAATGGAAATTGGAGGAGGCACGCAAGGTTGAGCAAGCTAGGTTAGCTGGACAGGCCGCGCTTGCAATGGCAGAAATGGAGAAAGCTAAGGCCAAAGCTGCAATGGAGGCAGCGGAGGAAGCCAGGAGGATGGCTGAGAAGGAAgcacagaaaagaaagaatgcaGAGATGAAGGCCAAGAGAGAGGCAGATGAGAAAGACAGGGCAGTAACTGCTTTGGTTCAGAGTGATGTTCGATATAGAAAATACACCATAGAGGAGATTGAAACGGCTACTGAAAAATTCTCCCCATCAATGAAATTAGGTGAAGGTGGTTATGGGCCTGTGTATAAAGGCAAACTTGATCACACACCAGttgcaattaaaattttaagacctGATGCAGCTCAGGGCAGGAGACAATTCAACCAAGAGGTTGAGGTGTTAAGCTGCATTAGACATCCGAACATGGTCCTTCTCCTTGGTGCTTGCCCTGAGTATGGTTGCTTGGTGTATGAATATATGGATTATGGTAGCTTAGAAGATAGATTTTTACGGAAAAACAATAGTCCGCCTATTCCCTGGTGGAAACGGTTCCAAATTGCCGCTGAGATTGCAACTGCACTTCTTTTCCTTCACCAAAAAAAGCCAGAACCTCTCGTGCACAGGGATCTTAAACCTGCCAACATTCTCATAGACCGAAATTACGTGAGTAAAATCAGTGATGTTGGCCTGGCACGATTAGTTCCACCTTCTGTAGCAGATAGTGTCACACAATATCACATGACTTCAGCAGCTGGAACATTTTGTTACATTGATCCGGAGTATCAACAGACAGGAATGTTAACAACAAAATCAGATATATATTCCTTGGGGATAATGCTGCTCCAAATTATCACAGCCAGGTCTCCCATGGGTATAGCTCACCATGTTTCGAGGGCAATGGAAAAGGGAAGGTTTTCAGAGATGCTTGACCCTGTGGTGACTGATTGGCCAGTTGAAGAGGCTCTGGCATTTGCCAATGTGGCATTGAAATGTGCAGAGCTCAGCAAGAGGGACAGGCCGGATCTTGCAAAAGTTGTAGTACCTGAGCTTAACAGGTTAAGAGACCTTGAATATACATTAACCAATAATCAAGTTTATAGCAGTAATAATAAGATTCCTGGCTATTTTGGACGTCCTCCTACTCCAACACGAAATCCACATTCAAAGACATCAATTAGGAATCAGgAGGTGATCTCTAAGAGTGATGTTCAGGAGTCTATACCATCCCCAAAAACGGAATATTACAGCTTTGGAGATTG 2405 0.4258 MGLELEFHIHLQSKSTEQLLLAKGTDSGVRQLLPLRNSIMSGHQPFDGNAPPFQSTLVAVDKDKSSGYAFRWAINHLDNPVVVLLHVRNKNNPHQGTNVFPPDDNDLVNIFIPLRGVCPRKAVQIKEAVLDDSDVARGILNFANKYYVHSIVIGASTKNSLSSFHKKFKGHDAPTTLTKTITRSAPDFSSVYVISKGKIMSARPALRAMANSVTPPRQPPPQELMHCESELVVRAPPATRGGKNEELERWSLERMNNGIRTAVRERPRISTSGMSVDNIDLSVLSQRSPISRDSLLDESDFSGSLAFASMDVTKSDLDFSITSDTPRTPTGSQSTREMEAEMKRLRLELKQTMEMYSSACKEAISAKNEANEISQWKLEEARKVEQARLAGQAALAMAEMEKAKAKAAMEAAEEARRMAEKEAQKRKNAEMKAKREADEKDRAVTALVQSDVRYRKYTIEEIETATEKFSPSMKLGEGGYGPVYKGKLDHTPVAIKILRPDAAQGRRQFNQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRFLRKNNSPPIPWWKRFQIAAEIATALLFLHQKKPEPLVHRDLKPANILIDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGIMLLQIITARSPMGIAHHVSRAMEKGRFSEMLDPVVTDWPVEEALAFANVALKCAELSKRDRPDLAKVVVPELNRLRDLEYTLTNNQVYSSNNKIPGYFGRPPTPTRNPHSKTSIRNQEVISKSDVQESIPSPKTEYYSFGD 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00542 801 Pfam Protein tyrosine and serine/threonine kinase 473 728 IPR001245 GO:0004672|GO:0006468
Bva10g00542 801 Coils Coil 335 355 - -
Bva10g00542 801 Coils Coil 395 441 - -
Bva10g00542 801 SUPERFAMILY Protein kinase-like (PK-like) 451 728 IPR011009 -
Bva10g00542 801 ProSiteProfiles Protein kinase domain profile. 469 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00542 801 Gene3D Phosphorylase Kinase; domain 1 447 541 - -
Bva10g00542 801 MobiDBLite consensus disorder prediction 319 338 - -
Bva10g00542 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Bva10g00542 801 PANTHER OS02G0152300 PROTEIN 55 751 - -
Bva10g00542 801 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 55 751 - -
Bva10g00542 801 Pfam Universal stress protein family 54 163 IPR006016 -
Bva10g00542 801 MobiDBLite consensus disorder prediction 753 801 - -
Bva10g00542 801 SMART serkin_6 469 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00542 801 MobiDBLite consensus disorder prediction 319 336 - -
Bva10g00542 801 Gene3D HUPs 37 167 IPR014729 -
Bva10g00542 801 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 53 164 - -
Bva10g00542 801 CDD STK_N 58 197 - -
Bva10g00542 801 Gene3D Transferase(Phosphotransferase) domain 1 542 753 - -
Bva10g00542 801 MobiDBLite consensus disorder prediction 419 440 - -
Bva10g00542 801 MobiDBLite consensus disorder prediction 765 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00542 Bva-Chr10 5037951 5042462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00542 127 738 Receptor kinase-like Gene Family AT5G12000 63.355 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva10g00542 PK_Tyr_Ser-Thr 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00542 - - qlo:115974974 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00542 10 5037951 5042462 Bva10g00542 10 5037951 5042462 ECH
Bva10g00542 10 5037951 5042462 Bva06g02252 06 14696194 14700198 ECH