Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00541 ATGTCGACAATATACGTGTTAGAACCGCCGACGAAAGGGAAGGTGGTGTTGAAGACGACGCACGGTCCTCTTGACATTGAGTTGTGGCCGAAGGAGGCCCCAAAAGCCGTCAGGAACTTCGTCCAGCTCTGCCTTGAAGGCTACTACGTTAACACCATCTTTCACCGTCTCATCAAGGACTTTCTTGTTCAGGGTGGTGATCCCACCGGCACTGGAACAgGTGGTGAAAGTATTTATGGGAGTGTTTTCTCCGATGAGTTTCATTCACGTCTAAGATTTAAGCACAGAGGTATTGTTGCAATGGCCAATGCTGGATCAACACATTCTAATGGGAGTCAGTTTTTTATAACTCTGGATCGTTGTGACTGGCTTGATAAAAAGCATACCATTTTTGGGAAgGTGACTGGAGATACAATTTATAATCTTGTGAGTTTGGGTGAACTTGAAACAGATAAGAATGATCGACCTTTAGATCCCCCGAAGATATTATCAATTGAGGTGTTATGGAACCCATTTGAGGATATCATTCCAAGAACTATCCCAAAATCTCAGATCCAAGCCACAACTGATGCCGACAGTAAAgattcaaagaagaaagctgtaaaAAAGTTGAACTTGCTTTCCTTTGGagaagaagctgaagaagaggaaaaggaattGGCTTCTGTAAAGCAAAAGATTAAGAGCAGTCATGACGTCTTGAATGATCCTCGTCTTCTAAAGGATGGAACCTCTAATAATGAATTGAGTTCATCTAGTGTTAAATCAACAAGGGATGTGCAGTTATCTGTTAGGGATGCATTAAgcttaaagaaagaagaaccTCAGAAAGATTTGGGACCTGATAATTTTACCAGCCTTGATGACAGCGATGATGACGATGCAGACTTTGACGCACGTATGCGCATGCAAATACTCAAAAAACGGAAGGAGATGGGTGATGTCCCTTCCAAAGCAAAATTGCAAAATGGAAACTCCAGTCCAAAGGATCGTGATACATCAGCAGACAGATTTGATGCTGTAAGTGATGATGATCAACCAAGAGTGGAAAAATTATCCTTGAAGAAAAAGGGAATAGGTTCTGAAGCAAGAGCTGAAAGAATGGCTAATGCAGACTCAGATCTTCAGTTGTTGAATGAAGCTGAACGAGGAAGGCAGTTACAGAAACAGAAGAAACGCAGACTTAAAGGCCGTGAAGATGAAATTCTGGCAAAACTCgagaaatttaagaaaagtcTATCAGAAAAGACAACACCTACGACTGTTGAATCTGGTGGTGGTATTAAAGAGAACTTGTCTGACTGGAAGAGCGCTACTTTAAAATTTGGGCCCGAGTCTGGCAAGGATCGCATGTCTCGTAATGAAGACCCAAACGACTATGTTGTACATGACCCTCTTTTAGAAAAGGGGAAAGAGAAGTTCAATAAGATGGTAGCCAAACAAAAGAGGCGAGAGCGAGAATGGGCTGGGAAATCTCTTACatg 1484 0.3982 MSTIYVLEPPTKGKVVLKTTHGPLDIELWPKEAPKAVRNFVQLCLEGYYVNTIFHRLIKDFLVQGGDPTGTGTGGESIYGSVFSDEFHSRLRFKHRGIVAMANAGSTHSNGSQFFITLDRCDWLDKKHTIFGKVTGDTIYNLVSLGELETDKNDRPLDPPKILSIEVLWNPFEDIIPRTIPKSQIQATTDADSKDSKKKAVKKLNLLSFGEEAEEEEKELASVKQKIKSSHDVLNDPRLLKDGTSNNELSSSSVKSTRDVQLSVRDALSLKKEEPQKDLGPDNFTSLDDSDDDDADFDARMRMQILKKRKEMGDVPSKAKLQNGNSSPKDRDTSADRFDAVSDDDQPRVEKLSLKKKGIGSEARAERMANADSDLQLLNEAERGRQLQKQKKRRLKGREDEILAKLEKFKKSLSEKTTPTTVESGGGIKENLSDWKSATLKFGPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNKMVAKQKRREREWAGKSLT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00541 494 MobiDBLite consensus disorder prediction 234 295 - -
Bva10g00541 494 MobiDBLite consensus disorder prediction 446 467 - -
Bva10g00541 494 MobiDBLite consensus disorder prediction 240 263 - -
Bva10g00541 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Bva10g00541 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Bva10g00541 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Bva10g00541 494 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Bva10g00541 494 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Bva10g00541 494 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 208 - -
Bva10g00541 494 MobiDBLite consensus disorder prediction 330 369 - -
Bva10g00541 494 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Bva10g00541 494 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Bva10g00541 494 MobiDBLite consensus disorder prediction 308 399 - -
Bva10g00541 494 Coils Coil 378 398 - -
Bva10g00541 494 CDD cyclophilin_CeCYP16-like 8 179 - -
Bva10g00541 494 Coils Coil 206 233 - -
Bva10g00541 494 Gene3D - 2 182 IPR029000 -
Bva10g00541 494 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 208 IPR044666 -
Bva10g00541 494 MobiDBLite consensus disorder prediction 415 467 - -
Bva10g00541 494 SUPERFAMILY Cyclophilin-like 14 181 IPR029000 -
Bva10g00541 494 MobiDBLite consensus disorder prediction 265 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00541 Bva-Chr10 5032290 5037528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00541 9 172 U-box Gene Family AT5G67530 48.780 2.02e-45 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00541 K12737 - gmx:100793148 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00541 10 5032290 5037528 Bva10g00541 10 5032290 5037528 ECH