Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00532 ATGAGTACCGATAATAATCCCAAACCAGAAGATTCCCCGGACAGCGATGATTTCACCAACTTGTCTGAGTACTTGAAATTAGATGACTTTGAAGATCCCGATTCTTTCTTCACAGAACATGCCCCATTCCAGGATTTTCAAGCCAAGGACTTTGGAGCAAGTGGCAGCACCCACTTTCAGGGCTCTTCCAGTACCACAAGGGACACTAGCAGTGGTCGTGAGATCCAGAGGGAAGTCAAAGAAAGAGTTgcattcaaaacaaaatcagaGGTTGAAATACTCGATGATGGATACAAGTGGAGGAAGTATGGCAAGAAGATGGTGAAGAACAGCCCGAATCCAagGAACTATTATAGGTGTTCTGTGGATGGATGCCCCGTGAAGAAAAGAGTGGAGAGAGATAGGGATGATCCCAAGTATGTAATAACAACTTATGAAGGCGTCCACACCCATCCGAGTTCTTA 464 0.4332 MSTDNNPKPEDSPDSDDFTNLSEYLKLDDFEDPDSFFTEHAPFQDFQAKDFGASGSTHFQGSSSTTRDTSSGREIQREVKERVAFKTKSEVEILDDGYKWRKYGKKMVKNSPNPRNYYRCSVDGCPVKKRVERDRDDPKYVITTYEGVHTHPSS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00532 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 153 IPR044810 GO:0003700
Bva10g00532 154 SUPERFAMILY WRKY DNA-binding domain 87 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00532 154 MobiDBLite consensus disorder prediction 1 20 - -
Bva10g00532 154 Pfam WRKY DNA -binding domain 95 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00532 154 ProSiteProfiles WRKY domain profile. 89 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva10g00532 154 MobiDBLite consensus disorder prediction 50 70 - -
Bva10g00532 154 MobiDBLite consensus disorder prediction 49 77 - -
Bva10g00532 154 Gene3D WRKY domain 81 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva10g00532 154 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 4 153 - -
Bva10g00532 154 SMART WRKY_cls 94 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00532 Bva-Chr10 4989984 4990843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00532 82 153 WRKY Transcription Factor Family AT5G26170 86.111 2.06e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva10g00532 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00532 - - gmx:100796836 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00532 10 4989984 4990843 Bva10g00532 10 4989984 4990843 ECH