Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00529 ATGAGTTTAAGAGCAGCTGAAGATGATTCGGATTCAGAAATTCATGTCCCAGCAGAGATAGACTGGCACATGCTTGATAAGtccaaattcttcttcctagGCGCCGCTTTATTTTCCGGTGTATCAGCTGCGCTTTATCCCATTGTTTTATTGAAGACCCGTCAACAGGTTTGTTCAACACAGATTTCTTGCTTGAAAATGTCTTTTTCCATTATGCGTTACGAAGGTTTCAGAGGGTTTTACAAAGGTTTTGGTACTTCCTTGATGGGAACAATCCCTGCTCGAGCACTTTACATGGGTGCCCTCGAAGTTACTAAGAGTAATGTTGGCACTGCCACGGTTGGGTTGGGGCTTTCAGATACCACAGCCACGGCCATAGCTAATGCTGCCGCAGGGGTAAGTTCTGCCATGGCTGCCCAATTAGTTTGGACCCCAGTTGATGTCGTGAGCCAGAGACTCATGGTTCAAGGCTGCAGTAGCAGCAGTGGAAGCAAAGACGTACTCTCCAGTGTTCATTCTGGTGGGAATTACAGGAACGGTCTTGATGCGTTTAGGAAAATTGTTTATGCAGATGGACTGAGAGGATTGTACAGGGGATTTGGGATTTCAATAGTAACTTATGCACCATCCAATGCAGTTTGGTGGACTTCTTATTCTATGGCTCATAGGCTCATCTGGGGTGCTTTCGGTTGCCGCATGGGTAAGAGGGATGAGAGTAATTTAGCCAATGGGTGTAGTTTTAGGCCTGATTCCAAAGCAGTGGTAGCAGTACAAGGGTTGAGTGCCGTCATGGCCAGTGGGGTTTCAGCAATTATAACTATGCCACTTGACACAATCAAGACAAGGTTGCAGGTGTTGGATGCAGAGGAGAATGGACGAAGAAGGCCATTAACTGTTATGCAGACCGTTAaggatttggttaaagaaagTGGCCTCGTTGCTTGTTACAGAGGATTGGGGCCAAGGTGGGTTTCAATGTCCATGTCTGCAACAATCATGATTACCAGCTATGAGTTTTTGAAACGAATGTCTAAAAAGAGCCAGTA 1046 0.4446 MSLRAAEDDSDSEIHVPAEIDWHMLDKSKFFFLGAALFSGVSAALYPIVLLKTRQQVCSTQISCLKMSFSIMRYEGFRGFYKGFGTSLMGTIPARALYMGALEVTKSNVGTATVGLGLSDTTATAIANAAAGVSSAMAAQLVWTPVDVVSQRLMVQGCSSSSGSKDVLSSVHSGGNYRNGLDAFRKIVYADGLRGLYRGFGISIVTYAPSNAVWWTSYSMAHRLIWGAFGCRMGKRDESNLANGCSFRPDSKAVVAVQGLSAVMASGVSAIITMPLDTIKTRLQVLDAEENGRRRPLTVMQTVKDLVKESGLVACYRGLGPRWVSMSMSATIMITSYEFLKRMSKKSQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00529 348 SUPERFAMILY Mitochondrial carrier 23 340 IPR023395 -
Bva10g00529 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 348 - -
Bva10g00529 348 Gene3D Mitochondrial carrier domain 30 348 IPR023395 -
Bva10g00529 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Bva10g00529 348 Pfam Mitochondrial carrier protein 256 347 IPR018108 -
Bva10g00529 348 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Bva10g00529 348 Pfam Mitochondrial carrier protein 124 226 IPR018108 -
Bva10g00529 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 224 IPR018108 -
Bva10g00529 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 348 - -
Bva10g00529 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00529 Bva-Chr10 4980046 4981749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00529 1 348 Chloroplast and Mitochondria Gene Families AT1G72820 66.952 5.85e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00529 K15121 - tcc:18588117 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00529 10 4980046 4981749 Bva10g00529 10 4980046 4981749 ECH
Bva10g00529 10 4980046 4981749 Bva06g02263 06 14741894 14743637 ECH