Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00521 ATGGCGAATAACAAAGGCAAAGACATTGTTCCCTCCCTCgatcaatatcaatatgatGATTCCCTTTTCGAAAACATCAACATTAACGATTTCGGGAATGATCCCGATCCTACGTTTGCCGATATGTGGCAATATGAAGGACCCTCTACTGACTCTTCTTCATTGCCTCAACAAAATAATGGAAATGGACAAGGACATGAAAATAGAATTGGTCCAAATGAAACTTTATATGATAATGATCCGTTTTCAGACCCAATGATTCAACAGTGGGGAACTTCTTCTATCAACGATGGAGGGAACTTTGAAGCGGGTCTTTCAGAAGTTCATGGGCAAAAGAGCCATCCATATCCAAATGCTTCGAATCtaacttttaatattgatCCGTTTTCAGACCCAATGATACAACATGTGGGTACTTCTTCTATCAACCAAGGAGGGAACTTTGAAATGGGTCCACCCGAACTTCACAGGGAAAACAGCCATCCATGTCCAAATGGACCAGGAAACTCCAGTGAAACGATGCCACCTCTACTTTGGCCAGAGCCACCACTTCCATCTTTCTGCGATTCCTGTTCAATGCTCAGAGAAATCGTTCATACTAATGGTGATAACGTTATAAAACTCGAGATTCATGGAAGGGTCGGCCTCATCCGTCATGCAATTCAGAAGCAGAGTACCAATAATGGTACTTGTGATTCTCAAATATTTGATTTAAGTGAGAAAAGCTATGAAGAAATCAAGATTTTCTTAACGAAGTATTGCTTACACCATAAGTCATCAGGCTACAATTTGATGCCTGACCCTCTCTCGACTTATTATGAAGCCCTCTGTGTTGGTCTAGACTTGAGCACTGGTCTCAATGATGAACCTCATCCCAATTTAGGAGCACTATCTCCTAATGTGGAACAAGAAGCTCCTGATGTGGAACAAGAAGCTGAGGCCGAAGTTGGGGTAGAAAGGGCTCCAAAAAATACCGTGGCAATACAgAGGGAGAGAGTGGGGAAGATGACATTGGTGGATTTCACTGATTACTTTCATCTACCTATTGAAGACGCAGCGAAGAAAGTAAACTTATGCCCCACggttataaagaaaatatgccGCAAAGAAGGACTAAAGCGATGGCCACATCGAAAGTTAAAAGCCCTTGTGAAGCAAATATCAGCATTGAAGCAACGTTTAAATGCAGAAAACCCAGAATCAAGGGAACTAACTGAAGCAGAAATTGAGAGACTCGAAGAAGAAATGATTCAACATTGTGGCGGGATCTGTCCAACTTTAGTTGAAGAATA 1292 0.4048 MANNKGKDIVPSLDQYQYDDSLFENININDFGNDPDPTFADMWQYEGPSTDSSSLPQQNNGNGQGHENRIGPNETLYDNDPFSDPMIQQWGTSSINDGGNFEAGLSEVHGQKSHPYPNASNLTFNIDPFSDPMIQHVGTSSINQGGNFEMGPPELHRENSHPCPNGPGNSSETMPPLLWPEPPLPSFCDSCSMLREIVHTNGDNVIKLEIHGRVGLIRHAIQKQSTNNGTCDSQIFDLSEKSYEEIKIFLTKYCLHHKSSGYNLMPDPLSTYYEALCVGLDLSTGLNDEPHPNLGALSPNVEQEAPDVEQEAEAEVGVERAPKNTVAIQRERVGKMTLVDFTDYFHLPIEDAAKKVNLCPTVIKKICRKEGLKRWPHRKLKALVKQISALKQRLNAENPESRELTEAEIERLEEEMIQHCGGICPTLVEE 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00521 430 MobiDBLite consensus disorder prediction 45 69 - -
Bva10g00521 430 Coils Coil 377 397 - -
Bva10g00521 430 MobiDBLite consensus disorder prediction 153 172 - -
Bva10g00521 430 PANTHER RWP-RK DOMAIN PROTEIN 7 421 - -
Bva10g00521 430 PANTHER PROTEIN RKD4 7 421 IPR044607 GO:0003700
Bva10g00521 430 MobiDBLite consensus disorder prediction 33 95 - -
Bva10g00521 430 Pfam RWP-RK domain 336 383 IPR003035 -
Bva10g00521 430 ProSiteProfiles RWP-RK domain profile. 323 403 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00521 Bva-Chr10 4958330 4960555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00521 277 420 AtRKD Transcription Factor Family AT5G66990 29.630 1.07e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bva10g00521 RWP-RK 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00521 - - cam:101503746 254.988