Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00518 ATGAGCAGAAGGGACAGCCCTCAAACTCAGCTCCGCCTCCAAACACCCCCTAGCCCTGCCCCTCGCGGATGCTGTCCAGGTTTTAGCAATGTCAAGAATACGGCATCAACATCAGCTGTATCAGTCTCCCAACAAAATATTACAGAGCAACATTCGATAAGATTGGAAACTAAGgtggCGGATTTAGAAAAGGAAGTGGAAAGACAGAAAGAACTACGAATGATGTATAGGAAGAGGATGGAAAGAACACAAGATTACTTGAGGTACTGCCTTCAGATAGCACAAGAGAATGGAATCTTGGACCTCATTGTCCACTACAAAGGTGAATTAGCAGGGCAAACAGCTTCTCCATCTCCTTTGTCTGTCCACACCCCAAATCATTATAATAGAAGCCCTCAAACTCAAATCACTACTCCTAGTTCCACACCACATCACCCGTCCCATCCTGTTCTAGCAGCCGTTACGCATCAGGCTGAAATCAATGGCTGGTACATTGATCCCACTGAgATACTATTGGAAGCGAAAATCGGAGAGGGAAGCACGGCAGAGATTTATCGCGGAACATGGCGAGGACTTGATGTGGCGGTGAAATGTATATCTGCGGAATTTTTCGGTACAAACGCAAACGGCGTGGCATTTTTTGCTCAGGAGATTGAAACATTATCGAGGCAACGGCACCGTTTCGTGCTTCAGCTAATAGGTGCATGCCTTGAGCCTCCGCATCATGCTTGGGTGGTGACAGAGTATATGAGGACGACGCTCAAGGAGTGGCTGCACGGCCCAGGAAAGAGGAGGAAAGAGAGAATAGTAGAACTTGCCCCCTTGAAAGAGAGGGTTAGCAAGGCCTTGGAGATTGCTCAGGCCATGCGATATCTGCACGAACAAAAGCCAAAAGTGATACACCGTGACTTGAAGCCAGGTAACATCTTTTTGGATGATGCCATGCACGTCAGGGTCGCCGATTTTGGCCATGCCCGCTTCTTGGATGATGAGGAAATGGCTCTCACCGGCGAAACAGGAACATATGTGTACATGGCACCAGAGGTGATCCGATGCGAGCCTTACAATGAAAAGTGTGATGTATACAGTTTTGGAGTGATACTCAACGAGCTTCTAACTGGGAAATACCCATACATTGAGACAGACTACGGTCCCACCAAGattgcTATGGAAGTGGTGGAGGGTAAGCTGAGGCCAGAGCTTCCAGAGGATAAGGATGGAGAATTGGCAGAACTGATTGAGCTGATTTGTGTTTGTTGGGATGGAAATCCGGCTGTTCGACCATCCTTCGCAACCATCACTAATACCCTTAAAACCTA 1319 0.4731 MSRRDSPQTQLRLQTPPSPAPRGCCPGFSNVKNTASTSAVSVSQQNITEQHSIRLETKVADLEKEVERQKELRMMYRKRMERTQDYLRYCLQIAQENGILDLIVHYKGELAGQTASPSPLSVHTPNHYNRSPQTQITTPSSTPHHPSHPVLAAVTHQAEINGWYIDPTEILLEAKIGEGSTAEIYRGTWRGLDVAVKCISAEFFGTNANGVAFFAQEIETLSRQRHRFVLQLIGACLEPPHHAWVVTEYMRTTLKEWLHGPGKRRKERIVELAPLKERVSKALEIAQAMRYLHEQKPKVIHRDLKPGNIFLDDAMHVRVADFGHARFLDDEEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVILNELLTGKYPYIETDYGPTKIAMEVVEGKLRPELPEDKDGELAELIELICVCWDGNPAVRPSFATITNTLKT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00518 439 ProSitePatterns Protein kinases ATP-binding region signature. 176 197 IPR017441 GO:0005524
Bva10g00518 439 SMART serkin_6 170 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00518 439 PANTHER OS09G0443600 PROTEIN 33 438 - -
Bva10g00518 439 ProSiteProfiles Protein kinase domain profile. 170 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00518 439 SUPERFAMILY Protein kinase-like (PK-like) 138 436 IPR011009 -
Bva10g00518 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Bva10g00518 439 Pfam Protein kinase domain 173 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00518 439 Coils Coil 52 79 - -
Bva10g00518 439 CDD STKc_MAP3K-like 176 437 - -
Bva10g00518 439 Gene3D Phosphorylase Kinase; domain 1 158 251 - -
Bva10g00518 439 Gene3D Transferase(Phosphotransferase) domain 1 252 439 - -
Bva10g00518 439 MobiDBLite consensus disorder prediction 1 16 - -
Bva10g00518 439 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 438 - -
Bva10g00518 439 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00518 Bva-Chr10 4939298 4940960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00518 163 437 MAP Kinase Kinase Kinase AT4G35780 38.768 2.88e-54 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Bva10g00518 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00518 - - gmx:100810435 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00518 10 4939298 4940960 Bva10g00518 10 4939298 4940960 ECH