Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00511 atggcaaTGGCTCCAATGAGCAGTCACAGTGGCAAGAAAGAACCTTGCAAAGGAGCGTGGACAGGTGAGGAGGACCAGAAACTGATCCAAGCCATTGAAATTTATGGTCCAAAGAGGTGGAAGATTGTTGCAGCCAAAGCAGGTCTGAATCGATGTGGAAGAAGTTGCAGATTGAGATGGTTGAATTACCTTCGACCCAATATCAAGAGAGGCAACATATCAGACCAAGAGGAGGATTTAATATTAAGGCTTCACAAACTTTTGGGGAACAGGTGGTCGTTAATTGCTGGAAGACTACCTGGTCGAACTGACAATGAGATTAAGAATTATTGGAACTCTCATTTGGGCAAGAAGATAAAGCTCCAAAGCCAAAACagagttttgaaaatagagTCCATGCAGCCACCGGGAGAGACAGATGCAGTTAAGGTCCTTGAggatagagaaaaagatacCACCAAGGTTGAGGAGGAATCAGAGACTAGGTTTATTGAAGGCGATGACTTGTTTCATTATGCGAACGAGGGCTCACCGGATATGGAATGGACGAGTGAATTTCTTGAAATAGACGAGAGTTGGTTTgaatttgcata 593 0.4064 MAMAPMSSHSGKKEPCKGAWTGEEDQKLIQAIEIYGPKRWKIVAAKAGLNRCGRSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLGKKIKLQSQNRVLKIESMQPPGETDAVKVLEDREKDTTKVEEESETRFIEGDDLFHYANEGSPDMEWTSEFLEIDESWFEFA 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00511 197 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Bva10g00511 197 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 6 196 - -
Bva10g00511 197 SUPERFAMILY Homeodomain-like 17 111 IPR009057 -
Bva10g00511 197 Gene3D - 17 69 - -
Bva10g00511 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 64 IPR017930 -
Bva10g00511 197 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 196 - -
Bva10g00511 197 CDD SANT 19 64 IPR001005 -
Bva10g00511 197 SMART sant 69 117 IPR001005 -
Bva10g00511 197 SMART sant 16 66 IPR001005 -
Bva10g00511 197 Gene3D - 73 140 - -
Bva10g00511 197 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Bva10g00511 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Bva10g00511 197 CDD SANT 74 115 IPR001005 -
Bva10g00511 197 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Bva10g00511 197 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva10g00511 Bva-Chr10 4917721 4918773 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00511 17 129 MYB Transcription Factor Family AT5G40330 61.947 8.19e-51 162
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva10g00511 Myb_DNA-binding 2.2e-16 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00511 K09422 - qsu:111997867 266.929
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00511 10 4917721 4918773 Bva10g00511 10 4917721 4918773 ECH
Bva10g00511 10 4917721 4918773 Bva06g02276 06 14789692 14790505 ECH
Bva05g01101 05 5676798 5678307 Bva10g00511 10 4917721 4918773 ECH