Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva10g00511 | atggcaaTGGCTCCAATGAGCAGTCACAGTGGCAAGAAAGAACCTTGCAAAGGAGCGTGGACAGGTGAGGAGGACCAGAAACTGATCCAAGCCATTGAAATTTATGGTCCAAAGAGGTGGAAGATTGTTGCAGCCAAAGCAGGTCTGAATCGATGTGGAAGAAGTTGCAGATTGAGATGGTTGAATTACCTTCGACCCAATATCAAGAGAGGCAACATATCAGACCAAGAGGAGGATTTAATATTAAGGCTTCACAAACTTTTGGGGAACAGGTGGTCGTTAATTGCTGGAAGACTACCTGGTCGAACTGACAATGAGATTAAGAATTATTGGAACTCTCATTTGGGCAAGAAGATAAAGCTCCAAAGCCAAAACagagttttgaaaatagagTCCATGCAGCCACCGGGAGAGACAGATGCAGTTAAGGTCCTTGAggatagagaaaaagatacCACCAAGGTTGAGGAGGAATCAGAGACTAGGTTTATTGAAGGCGATGACTTGTTTCATTATGCGAACGAGGGCTCACCGGATATGGAATGGACGAGTGAATTTCTTGAAATAGACGAGAGTTGGTTTgaatttgcata | 593 | 0.4064 | MAMAPMSSHSGKKEPCKGAWTGEEDQKLIQAIEIYGPKRWKIVAAKAGLNRCGRSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLGKKIKLQSQNRVLKIESMQPPGETDAVKVLEDREKDTTKVEEESETRFIEGDDLFHYANEGSPDMEWTSEFLEIDESWFEFA | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva10g00511 | 197 | ProSiteProfiles | Myb-like domain profile. | 65 | 115 | IPR001005 | - | |
Bva10g00511 | 197 | PANTHER | TRANSCRIPTION FACTOR MYB114-LIKE | 6 | 196 | - | - | |
Bva10g00511 | 197 | SUPERFAMILY | Homeodomain-like | 17 | 111 | IPR009057 | - | |
Bva10g00511 | 197 | Gene3D | - | 17 | 69 | - | - | |
Bva10g00511 | 197 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 17 | 64 | IPR017930 | - | |
Bva10g00511 | 197 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 6 | 196 | - | - | |
Bva10g00511 | 197 | CDD | SANT | 19 | 64 | IPR001005 | - | |
Bva10g00511 | 197 | SMART | sant | 69 | 117 | IPR001005 | - | |
Bva10g00511 | 197 | SMART | sant | 16 | 66 | IPR001005 | - | |
Bva10g00511 | 197 | Gene3D | - | 73 | 140 | - | - | |
Bva10g00511 | 197 | ProSiteProfiles | Myb-like domain profile. | 12 | 64 | IPR001005 | - | |
Bva10g00511 | 197 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 65 | 119 | IPR017930 | - | |
Bva10g00511 | 197 | CDD | SANT | 74 | 115 | IPR001005 | - | |
Bva10g00511 | 197 | Pfam | Myb-like DNA-binding domain | 17 | 64 | IPR001005 | - | |
Bva10g00511 | 197 | Pfam | Myb-like DNA-binding domain | 70 | 115 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva10g00511 | Bva-Chr10 | 4917721 | 4918773 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva10g00511 | 17 | 129 | MYB Transcription Factor Family | AT5G40330 | 61.947 | 8.19e-51 | 162 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Bva10g00511 | Myb_DNA-binding | 2.2e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva10g00511 | K09422 | - | qsu:111997867 | 266.929 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva10g00511 | 10 | 4917721 | 4918773 | Bva10g00511 | 10 | 4917721 | 4918773 | ECH | |
Bva10g00511 | 10 | 4917721 | 4918773 | Bva06g02276 | 06 | 14789692 | 14790505 | ECH | |
Bva05g01101 | 05 | 5676798 | 5678307 | Bva10g00511 | 10 | 4917721 | 4918773 | ECH |