Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00503 ATGGTCACCGATCTACTgaaactttctctctctactcaACCGAAGCTCTGCTTCAATTTCAGAAGAAACCATGATGTTGCCCGCGTTGACTTTTTTTCTCCACTGTCCCAGCAACGACGCCGTAACTTCAGACGCCGGAGCATTCTCCGCCCACATTCGGGCCCAAATTTTGTCATATCAAACTCACTTGAGACTAGAATTGAATCACCGGACTTCCCTCATTTTCAACACCAGGGACACAACAAAGACTCGCCGATTCTACTCGATGTTACTGGAATGATGTGTGGAGCTTGCGTTTCCCGAGTCAAATCCATCTTGTCCGCCGATGACAGAGTTGACTCGGTTGTCGTTAACATGTTGACTGAAACCGCGGCGGTTAAGTTGAAGAAACTCGAGGAGGAAGTGGCTGGAGCTTCGTCTTCGGAGACTGGTATTCTGGACAGTGTTGCCGAGAACCTGGCTCAGAGATTGACTGAATGCGGATTTCCAACAAAGAGGAGGGTTGCAGGTTCAGGAGTGGCGGAAAATGTGAGGAAGTGGAAGGAGTtagtgaagaagaaggaggaacTGCTCGTGAAGAGTCGGAACCGTGTTGCTTTCGCTTGGACTTTGGTGGCATTGTGTTGTGGATCACACGCTTCGCATATTTTACATTCTTTGGGCATTCACATTGCTCATGGATCGCTATGGGATATTCTTCATAATTCGTATGTCAAAGGGGGTTTATCTTTGGGGGCGTTGCTGGGACCAGGACGAGAATTACTCTTTGATGGCCTAATGGCATTTAAGAAGGGATCACCAAATATGAACTCTCTTGTGGGATTTGGTTCCATATCTGCCTTTATCATAAGTTCGATCTCACTACTTAACCCCAGCCTGGCGTGGGATGCATCATTCTTTGATGAACCGGTCATGCTTCTTGGTTTCGTGCTTCTAGGACGTTCACTGGAAGAAAAGGCACGGATTCAAGCATCTAGTGATATGAATGAACTTCTATCTCTGATATCTACTCAGTCACGACTTGTCATTACCCCCTCAGAAGGTGCTCCATCTACTGACAGTGTGCTTTGCTCTGATGCAATTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGAGACTCAGTGTTGGTGCTCCCAGGAGAAACTATTCCTGTAGATGGAAAGGTAATTTCAGGAAGAAGTGTTGTGgatgaatctatgcttacgGGAGAATCACTGCCTGTGTTTAAGGAAGAGGGCCTTACAGTTTCAGCTGGAACTATAAATTGGGATGGCCCTTTAAGGATTGAAGCTTCTTCCACTGGCTCCAACACAATGATTTCCAAGATTGTTCGCATGGTTGAGGATGCTCAATCTCGTGAAGCACCGGTACAAAGGCTTGCAGATTCAATAGCCGGGCCATTTGTATACAGTGTAATGACTCTGTCAGCGGCAACATTTGGATTTTGGTATTTTATTGGGTCAAACATTTTTCCAGATGTTTTAGTTAACGATATTGCTGGCCCTGAAGGAGATCCTTTGCTTTTGAGCTTGAAACTCGCGATAGATGTCTTGGTTGTCTCTTGCCCTTGTGCACTAGGTCTTGCCACACCCACAGCAATCCTAGTTGGCACCTCACTGGGGGCAAGAAAAGGACTTCTTATTAGAGGAGGAGATGTGTTGGAACGCTTAGCCAGCATAAATTATATTGCTCTAGACAAGACAGGAACCATCACCAGAGGGAAACCAGTTGTTTCTGCCATAGgctcttttatttatgaagAAGAGGATATTCTTCAGATTGCTGCAGCAGTTGAGAAAACGGCATCACACCCAATAGCAAAGGCTATCGTCAATGAAGCTGAATCATTACAGTTGGTCCTTCCTGTCACAAAAGGACAATTAGTTGAACCAGGTTTTGGAACCTTGGCAGAAGTAGATGGACGTTTGGTTGCAGTTGGTGCTTTAGAATGGGTTCATGAACGCTTCCAGACAAAAAGGGAACCATCTGACTTGATGAATCTGGAACATGCTCTGATGAATCAATCATCGAAAAAGACATCTTCAAACTATTCAAAAACTATTGTTTATGTTGGACGTGAAGGGGAAGGCATCATTGCTGCTATTGCCATATCTGACATTTTGCGTGATGATGCTCAATCTACTGTGATGAGACTCCAGAAGAAGGGTATTAAAACTGTCCTCTTATCAGGAGACAGGGAAGAGGCAGTTGCAAGTATAGCAGAGACAGTGGGAATAGAAAGTGATTTTGTCAAAGCATCATTGGCTCCGCAGCAGAAATCTagatttatttcttctctgaAAGCTGCTGGACATCGTGTTGCAATGGTTGGTGATGGGATAAATGATGCACCCTCTTTAGCTGTAGCTGATGTTGGGATAGCTCTGCAGAATGAAGCTCAAGAGAACGCTGCGTCAGACGCAGCATCCATTATACTTCTTGGAAACAACATTTCGCAAGTTGTTGATGCGTTAGAGCTTGCACAGGCTACAATGGCAAAAGTGTACCAAAATTTGTCTTGGGCAATAGCGTACAATGCAGTTGCCGTACCCATCGCTGCTGGTGTGTTACTTCCTCAATTTGAATTTGCTATGACACCTTCACTTTCAGGAGGATTGATGGCTTTGAGCTCCATTTTCGTGGTTAGCAACTCATTGCTTCTACAGCTTCATGGGTCTAAGATGAGGAGGAAGGGCTCGCATCATCATCAATCACATGACTA 2726 0.4365 MVTDLLKLSLSTQPKLCFNFRRNHDVARVDFFSPLSQQRRRNFRRRSILRPHSGPNFVISNSLETRIESPDFPHFQHQGHNKDSPILLDVTGMMCGACVSRVKSILSADDRVDSVVVNMLTETAAVKLKKLEEEVAGASSSETGILDSVAENLAQRLTECGFPTKRRVAGSGVAENVRKWKELVKKKEELLVKSRNRVAFAWTLVALCCGSHASHILHSLGIHIAHGSLWDILHNSYVKGGLSLGALLGPGRELLFDGLMAFKKGSPNMNSLVGFGSISAFIISSISLLNPSLAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITPSEGAPSTDSVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGKVISGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFGFWYFIGSNIFPDVLVNDIAGPEGDPLLLSLKLAIDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLASINYIALDKTGTITRGKPVVSAIGSFIYEEEDILQIAAAVEKTASHPIAKAIVNEAESLQLVLPVTKGQLVEPGFGTLAEVDGRLVAVGALEWVHERFQTKREPSDLMNLEHALMNQSSKKTSSNYSKTIVYVGREGEGIIAAIAISDILRDDAQSTVMRLQKKGIKTVLLSGDREEAVASIAETVGIESDFVKASLAPQQKSRFISSLKAAGHRVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNNISQVVDALELAQATMAKVYQNLSWAIAYNAVAVPIAAGVLLPQFEFAMTPSLSGGLMALSSIFVVSNSLLLQLHGSKMRRKGSHHHQSHD 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00503 908 PRINTS P-type cation-transporting ATPase superfamily signature 778 797 - -
Bva10g00503 908 PRINTS P-type cation-transporting ATPase superfamily signature 565 579 - -
Bva10g00503 908 PRINTS P-type cation-transporting ATPase superfamily signature 723 733 - -
Bva10g00503 908 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Bva10g00503 908 SUPERFAMILY HMA, heavy metal-associated domain 85 128 IPR036163 GO:0046872
Bva10g00503 908 PANTHER ATP7, ISOFORM B 83 891 - -
Bva10g00503 908 SUPERFAMILY Calcium ATPase, transduction domain A 359 448 IPR008250 -
Bva10g00503 908 SFLD Haloacid Dehalogenase 548 831 - -
Bva10g00503 908 Gene3D - 576 709 IPR023299 GO:0000166
Bva10g00503 908 CDD P-type_ATPase_HM 197 888 - -
Bva10g00503 908 Pfam haloacid dehalogenase-like hydrolase 561 792 - -
Bva10g00503 908 CDD HMA 88 138 IPR006121 GO:0046872
Bva10g00503 908 ProSitePatterns E1-E2 ATPases phosphorylation site. 567 573 IPR018303 -
Bva10g00503 908 SFLD p-type atpase 548 831 IPR044492 -
Bva10g00503 908 Pfam E1-E2 ATPase 358 545 - -
Bva10g00503 908 Gene3D - 321 452 - -
Bva10g00503 908 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 567 659 IPR023299 GO:0000166
Bva10g00503 908 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 357 870 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva10g00503 908 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 269 889 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva10g00503 908 ProSiteProfiles Heavy-metal-associated domain profile. 85 166 IPR006121 GO:0046872
Bva10g00503 908 SUPERFAMILY Calcium ATPase, transmembrane domain M 302 691 IPR023298 -
Bva10g00503 908 Gene3D - 83 167 - -
Bva10g00503 908 Gene3D - 556 829 IPR023214 -
Bva10g00503 908 Pfam Heavy-metal-associated domain 88 129 IPR006121 GO:0046872
Bva10g00503 908 SUPERFAMILY HAD-like 563 886 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00503 Bva-Chr10 4881451 4889193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00503 261 890 Primary Pumps ATPases AT1G63440 36.434 3.92e-114 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00503 K17686 - gmx:100127402 1371.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00503 10 4881451 4889193 Bva10g00503 10 4881451 4889193 ECH