Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00502 ATGGCATTTCGGCTTGAACTCGTTCTTCTGGCATTTCTAGTTTGTTTCAATATCAGTTTAGTGGATTCGGACGAGGGGGCTACACTGTTGGAGATAAAGAAGTCTTTCAGGGACGTAGATAACGTTCTATATGATTGGACAGACTCGCCATCTTCAGATTATTGTGTTTGGAGAGGGGTCACCTGTGATAATGTCACATTCAACGTCGTCGCACTAAATCTTTCGAGTTTAAATCTTGATGGAGAAATTTCACCTGCACTTGGAGATCTTAACAGCTTGGTGTCAATTGACCTCAGGGGAAACCGTCTATCTGGCCAGATACCAGATGAGATTGGTGATTGTTCCTTCTTAAAAAACTTGGATTTGTCATTTAATGAGTTACGAGGGGATATcccattttcaatttcaaagttGAAACAACTAGAATATCTgattttgaaaaataaccaGTTAATTGGACCAATTCCTTCAACCTTATCTCAGATTCCAAACTTGAAGATTCTGGACCTGGCACAGAATAATCTTAGTGGTGAAATACCAAGGCTTATATATTGGAACGAAGTTCTGCAGTATCTTGGCTTGCGAGGAAACAATTTAGTAGGTTCACTCTCTCCAGATATGTGCCAGTTAACTGGATTGTGGTATTTTGATGTAAGAAACAACAGTTTGACCGGTAGCATCCCTGAGAACATTGGCAACTGTACTGCCTTCCAGGTCTTGGACTTGTCTTACAACCAGATAACAGGAGAGATACCTTTCAACATTGGGTTTCTGCAAGTAGCTACACTGTCATTGCAAGGCAATCAACTATCTGGGGAGATTCCATCAGTGATTGGTCTGATGCAAGCACTTGCTGTGTTGGATTTGAGTTGCAACTTGTTGACTGGGCCAATCCCTCCCATCTTAGGGAATTTGACATACACCGAAAAATTGTATTTGCATGGAAACAAGTTGACTGGTTCCGTCCCGTCAGAGCTTGGAAACATGACAAAGCTTCACTATTTGGAACTGAATGATAATCATTTGAGTGGACGTATCCCACCTGAGCTGGGAAAGCTAACTGACCTGTTTGACTTAAATGTTGCTAAAAACAACCTTGAGGGGCCAATACCTGATAATATTAGTTCATGTAAAAATCTTAACAGCTTCAATGTGCACGGGAACAAGTTGAATGGAACAATTCCCCCAGCTTTTCAGAGGTTGGAGAGTATGACCTATCTGAACCTTTCTTCCAACAATCTTCAAGGCTCAATTCCAATCGAGTTGTCACGGATTGGTAATTTGGATACATTGGACATTTCAAATAATAGAATTAGTGGCCCAATTCCTTCTTCTCTTGGTGACTTGGAACATCTCCTTAAGCTGAATCTGAGCAGGAATCATTTAGCTGGGTTTATCCCAGCTGAATTTGGTAATCTAAGAAGTGTTATGGATATAgatctttcaaataataatctttCAGGCTTGATTCCTGAAGAACTCAGTCAGCTTCAGAACATGAATTCATTGAGACTGGAAAACAACAAATTGACCGGGGATGTGATGTCACTTATGAATTGCCTCAGTCTCTCTTTTCTTAATGTGTCCTATAACAACCTAGTTGGTGTTATTCCCACAAGCAATAACTTCTCAAGGTTTTCTCCTGACAGTTTCATTGGAAACCCTGGTCTTTGTGGCTATTGGCTGAATTCACCATGTCATGGGTCTCACACTGCTGAACGAGTTACGCTATCAAAGGTGGCTATACTTGGAATTGCTCTTGGTGCTCTTGTGATTCTTCTCATGATATTACTAGCAGCTTGCCGACCATACAATCCAGCTCCCTTTCCTGATGGATCACTTGACAAACCAGTTAATTACTCGCCTCCAAAACTAGTGATACTTCATATGAATATGGCGCTTCATGTGTATGACGATATCATGAGGATGACTGAAAACCTGAgtgagaaatatataattggatATGGTGCATCAAGCACAGTATATAAATGTGTTCTTAAGAATTGCAAGCCTGTGGCTATCAAGAGGCTCTATTCTCATTATCCACAATCTTTCAAAGAATTTGAGACTGAACTTGAGACAGTTGGTAGCATCAAGCACCGGAATCTAGTTAGTCTACAAGGTTACTCCCTGTCCCCTTATGGGAACCTTCTGTTTTATGACTACATGGAAAATGGCAGTCTATGGGATATTCTTCATGGACCcaccaagaagaagaagctcgACTGGGATCTTCGTCTGAAAATAGCACTTGGAGCAGCTCAAGGGCTTGCTTATCTGCACCATGATTGCTGTCCCCGAATCATTCACAGAGATGTGAAATCATCTAATATCTTATTGGACAAGGACTTTGAGCCCCATCTCACTGATTTTGGGATTGCCAAAAGTTTGTGCCCCTCAAAATCCTACACTTCAACTTACATAATGGGCACAATAGGCTATATAGACCCTGAGTATGCTAGAACCTCCCGGCTGACTGAGAAGTCTGATGTATATAGTTATGGTATTGTTCTACTTGAGTTGCTAACTGGGAGGAAAGCTGTTGACAATGAATGCAATCTTCATCACCTGatTCTGTCCAAGACAGCAAACAATGCTGTTATGGAGACAGTTGATCCCGACATCAGTGCTACATGCAAGGACTTGGGAGCGGTGAAAAAGGTGTTTCAGCTTGCTCTTCTATGTACTAAGAGACAACCAGCTGATAGGCCAACAATGCATGAGGTAACCCGTGTGCTTGGAAGTCTTGTACCACCCATCTCCCCACCAAAACAACCAGCTCCACCACCACTTTCTCCACACCCCTCTGGTAAAGTGCCAAGCTACGTGGATGAGTATGCAAATCTTAAGACTCCACACTTGGTGAACTGCCCATCCATGAGCACCTCTGATGCCCAACTCTTCCTCAAGTTTGGAGAGGTAATTTCTCAGAACAGCGAGTA 2942 0.4089 MAFRLELVLLAFLVCFNISLVDSDEGATLLEIKKSFRDVDNVLYDWTDSPSSDYCVWRGVTCDNVTFNVVALNLSSLNLDGEISPALGDLNSLVSIDLRGNRLSGQIPDEIGDCSFLKNLDLSFNELRGDIPFSISKLKQLEYLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTAFQVLDLSYNQITGEIPFNIGFLQVATLSLQGNQLSGEIPSVIGLMQALAVLDLSCNLLTGPIPPILGNLTYTEKLYLHGNKLTGSVPSELGNMTKLHYLELNDNHLSGRIPPELGKLTDLFDLNVAKNNLEGPIPDNISSCKNLNSFNVHGNKLNGTIPPAFQRLESMTYLNLSSNNLQGSIPIELSRIGNLDTLDISNNRISGPIPSSLGDLEHLLKLNLSRNHLAGFIPAEFGNLRSVMDIDLSNNNLSGLIPEELSQLQNMNSLRLENNKLTGDVMSLMNCLSLSFLNVSYNNLVGVIPTSNNFSRFSPDSFIGNPGLCGYWLNSPCHGSHTAERVTLSKVAILGIALGALVILLMILLAACRPYNPAPFPDGSLDKPVNYSPPKLVILHMNMALHVYDDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRLYSHYPQSFKEFETELETVGSIKHRNLVSLQGYSLSPYGNLLFYDYMENGSLWDILHGPTKKKKLDWDLRLKIALGAAQGLAYLHHDCCPRIIHRDVKSSNILLDKDFEPHLTDFGIAKSLCPSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNECNLHHLILSKTANNAVMETVDPDISATCKDLGAVKKVFQLALLCTKRQPADRPTMHEVTRVLGSLVPPISPPKQPAPPPLSPHPSGKVPSYVDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00502 980 SMART LRR_typ_2 90 114 IPR003591 -
Bva10g00502 980 SMART LRR_typ_2 401 425 IPR003591 -
Bva10g00502 980 SMART LRR_typ_2 210 234 IPR003591 -
Bva10g00502 980 SMART LRR_typ_2 329 353 IPR003591 -
Bva10g00502 980 SMART LRR_typ_2 473 496 IPR003591 -
Bva10g00502 980 SMART LRR_typ_2 162 186 IPR003591 -
Bva10g00502 980 SMART LRR_typ_2 449 472 IPR003591 -
Bva10g00502 980 SMART LRR_typ_2 281 305 IPR003591 -
Bva10g00502 980 MobiDBLite consensus disorder prediction 919 936 - -
Bva10g00502 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 967 - -
Bva10g00502 980 SUPERFAMILY L domain-like 23 258 - -
Bva10g00502 980 SUPERFAMILY RNI-like 203 537 - -
Bva10g00502 980 ProSiteProfiles Leucine-rich repeat profile. 164 186 IPR001611 GO:0005515
Bva10g00502 980 Gene3D Ribonuclease Inhibitor 185 294 IPR032675 -
Bva10g00502 980 Pfam Leucine rich repeat 359 414 IPR001611 GO:0005515
Bva10g00502 980 Pfam Leucine rich repeat 427 486 IPR001611 GO:0005515
Bva10g00502 980 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Bva10g00502 980 SMART serkin_6 647 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00502 980 Gene3D Ribonuclease Inhibitor 22 184 IPR032675 -
Bva10g00502 980 MobiDBLite consensus disorder prediction 916 939 - -
Bva10g00502 980 Gene3D Ribonuclease Inhibitor 295 569 IPR032675 -
Bva10g00502 980 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 4 967 - -
Bva10g00502 980 Gene3D Transferase(Phosphotransferase) domain 1 723 918 - -
Bva10g00502 980 CDD STKc_IRAK 653 916 - -
Bva10g00502 980 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Bva10g00502 980 Gene3D Phosphorylase Kinase; domain 1 620 722 - -
Bva10g00502 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Bva10g00502 980 ProSiteProfiles Protein kinase domain profile. 647 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00502 980 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
Bva10g00502 980 SUPERFAMILY Protein kinase-like (PK-like) 624 913 IPR011009 -
Bva10g00502 980 Pfam Protein kinase domain 650 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00502 Bva-Chr10 4871591 4879664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00502 92 979 Receptor kinase-like Gene Family AT5G07180 66.479 0.0 1155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Bva10g00502 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00502 K20718 - gmx:100782307 1720.67