Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00501 ATGAATCTCCGCAAGGGCTCCAAAGTTTGGTTTGAAGACAGAGACTTGGCTTGGGTGGCAGCTGAAGTTGTAGACTTCTCTGCCAAGCAAGTCCAACTTGTAACTGCTCCTGGGAAGAAGGTTTTTGCTTCCCCTGAGAAGTTGTTCCCACGGGATGCGGATGAAGAGGAGCATGGGGGAGTGGAAGACATGACGAGGTTGGCATACTTGAATGAGCCTGGGGTTCTGTACAATCTTCGCAGAAGATATGCTCtgaatgatatatatACATATACAGGAAGCATTTTAATAGCAGTTAACCCATTCACAAAGCTTCCTCATCTGTATGATATCCATATGATGGAACAGTACAAGGGAGCTCCGTTTGGTGAGCTCAGCCCACATGTATTTGCTGTTGCTGACACATCTTATAGAGCGATGATGGATGAAGGAAAAAGTCAGTCTATTCTGGTTAGCGGTGAAAGTGGAGCTGGGAAAACTGAGACAACAAAGCTAATTATGCAGTATCTCACCTTTGTCGGTGGGCGTGCTGCTGATGATGACAGAACAGTTGAGCAGCAAGTTCTTGAATCAAATCCACTATTGGAGGCATTTGGTAATGCAAGGACTGTCAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTCGGACATACTTACTGGAAAGATCACGAGTGGTGCAGATAACAGATCCTGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGatgcagaaaaatataagttacAACATCCAAGTCATTTTCACTATTTAAATCAAAGTAAAACCTATGAACTAGATGGAGTAAGCAGTGCTGAAGAATACATGAAAACAAGGAGGGCAATGGATATTGTTGGCATAAGTCATGAGGAGCAGGAAGCCATATTTCGGATTTTAGCTGCCATTTTACATTTGGGAAACATTGAGTTTTCTGCTGGAAAAGAGCATGATTCATCAGTCATCAAGGATGAGAAATCAAGATTTCATATGCAGATGGCTGCTGATCTTTTCATGTGTGATGTGAACCTACTACTAGCAACATTGTGTACACGTTCAATACAAACCCGAGAAGGAAGTATTGTCAAAGCCCTTGATTGCAATGCAGCTGTTGCTGGCCGGGATACTTTGGCAAAGACTGTTTATGCTCGTCTCTTTGACTGGCTCGTTGATAAGATTAATAGATCTGTTGGGCAAGATCTCAATTCCCAGATGCAAATTGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAAGATAATAGTTTTGAGCAATTCTGCATTAACTTTGCAAATGAAAAGCTTCAACAGCATTTTAATGAGCATGTATTTAAGATGGAGCAGGAGGAGTATagcaaagaagaaatcaatTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGCATCGTAGCTCTATTGGATGAAGCTTGCATGTTTCCAAAATCAACGCATAAAACATTCTCAACGAAGTTGTTTCAGCATTTCCGGTCCCACCATCGGTTGGGAAAGGAAAAGTTTTCAGAAACAGATTTCACCGTATCTCATTATGCTGGAAAGGTCACATATCATACAGATACCTTCTTAGACAAAAACCGTGATTATGTTGTCGTTGAACATTGCAATTTATTGAATTCTTCCAAATGTCCTGTCGTGTCTGGTCTTTTCCCCTTGCCACCAGAGGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTGGCATCCAGATTTAAGCAACAACTTCAGTCGTTGATGGAGACCCTTAACTTAACAGAGCCTCATTACATACGATGTGTGAAGCCAAATTCATTGAATCGACCACAAAAGTTTGAGAATCCTAGTGTTATACACCAATTACGCTGTGGGgGTGTCCTTGAAGCTGTGCGGATAAGTCTTGCTGGTTACCCCACTCGAAGGGCTTACTCTGAGTTTGTGGATCGATTTGGGTTACTAGCACCTGAGTTAATGGATGGAAGTTATGATGAAAAAACTGCAACTgagaaaattttgcaaaagctaaagcttgaaaattttcagTTGGGAAGGACCAAGGTATTTCTCAGGGCAGGTCAAATTGGTATTTTAGACAACCGACGAGCTGAAGTTCTGGACAATGCTGCAAAATGTATCCAGCACCGACTGAGAACATTTATTGCACGCAGGGATTTTCTCTCAATCCAAGCTGCTGCATTTTCTCTTCAAGCATACTGCAGGGGATGTCTTACCCGGAAGATGTATGCGGCTAAACGGCAGACAGCAGCAACTATCTCAATTCAGAAGTATATTCGTATGTGGTTACTGAGGCATGCTTACTTAAAACTTATTTCTTCTGCTATTATCATACAATCCAATATTCGTGGCTTCACAACTCGCCAGAAGTTCTTGCATGGAAAAGAACACAAAGCTGCTGCTCTTATTCAGgcaTGTTGGAGGATGTTCAAGATTCGATCAGCTTTCCGACATCGTCAAGCTTCTATTGTGGCAATACAATGCCTTTGGCGGTGTAAACAAGCAAAAAGAGAGCTGCGCAGGCTTAAAAAAGAGGCTAATGAAGCTGGTGCCTTGCGTCTAGCTAAGAGTAAACTTGAGAAGCAATTGGAAGATCTGACATGGCGTTTACATCTTGAAAAAAGATTAAGGGTTTCCAATGAGGAGAACAGGGTAGCGGAGATTTCAAAACTTCAAAAGATGATAGAGGCTTTGACTCTTGAATTAGATGCAGCGAAATTGGCAACAATTAATGAGTGTAACAAGAATGCTGTGCTGCAAAATCAATTGGAATTGTCTGTAAAGGAGAAATATGCTTTAGAGCGAGAACTAGTTGGAATGGATGAACTGcgaaaggaaaattttctgttgaagagTTCTTTGGATGGCtttgaaaagaagaatgcAGCTCTAGAGCTTGAGCTCGAGAACGCTCAGAAAGAAAGTAATGAAACTATTGAGAAATTGAGGGAGGTTGAACTGAAGTGTTCTCAACTACAGCAGAATGTGAAAAGTCTTGAGGAGAAGCTTTTGAGTTTAGAGGATGAAAATCATGTCCTTCGTCAGAAAGCCTTGACTGTATCTCCTAAGAGTAACCGTCCGGGTTTTGCTAAGTCTTTTTCAGATAAATTCTCAGGTGCTATAGGTCCAACTCCACGGACTGAACGAAAGCCCATATTTGAGTCACCCACGCCCACCAAACTAATTGCCCCTTTTACACTCGCCCTGTCAGACTCTCGTCGATCTAAGTTGACAGCTGAGAGGCACCAGGATAACTACGAATTCCTCTCTAGGTGTATCAAAGAAGACTTGGGGTTTAAAAATGGTAAACCGCTGGCAGCTTGTATCATTTACAAATGTCTTCTTCATTGGCATGCCTTTGAATCCGAGCGTACAGCCATTTTTGATTACATAATTGAGGGAATTAATGATATTCTAAAGGTCAGGGATGATGACATCATCTTGCCGTATTGGCTGTCCAATACCTCAGCACTTCTGTGCCTCTTACAGAGAAACTTACGTTCAAATGGCTTTCTAGCTACCACTGCACAACGTTATACTGGATCTTCTGGCTTAACCAGCAGGATAGGGCACGGTCTGAAATCTCCGTTGAAATATATTGGATATGATGATGGTATATCACAAGTAGAAGCGAGATATCCAGCTATACTTTTCAAGCAACAACTAACAGCTTGTGTAGAGAAGATTTTTGGTCTGATGCgtgataatttgaaaaaggaaCTGTCTCCCCTTCTGGGCTTGTGCATTCAGGCACCCAAAACTGGACGAGTACATGGTGGGAAATCATCTAGATCTCCTGGTGGGCTTCCTCAACAGCCACCCAGTGGGCAGTGGGACaacatcataaaatttttggattcaCTTATGAGCCGACTTCGTGGAAATCATGTACCATCCTTTTTCATCCGTAAACTAGTTACACAAGTTTTTTCCTTCATCAATATTACGCTATTCAACAGTCTTCTCTTGCGACGTGAATGTTGCACTTTCTCAAATGGGGAATATGTAAAATCTGGTTTAGCCGAACTGGAGAAATGGATAGCTAATGCAAAGGAGGAGTATGCAGGAACATCCTGGCACCAGTTAAATTTCATAAGACAAGCTGTTGGTTTTCTGGTAATACAtcagaagaggaagaaatctTTGGAAGAGATTCGCCAGGATCTTTGTCCGGCCTTGACAGTGAGACAAATCTATCGCATCAGTACCATGTACTGGGATGACAAATATGGCACCCAGAGTGTATCCAATGAGGCAaTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAGAATCTAAcctcaaattcatttttgttggATGATGACCTGAGCATCCCTTTTTCTGCTGAAGACATAGATATGGCAATTCCTGCCATAGATCCTGACGATATTGATCTCCCAGCATTTTTATCGGAATATCCTTGTGCTCAGTTTCTTGGTCCACATCAGAAGTA 4556 0.3984 MNLRKGSKVWFEDRDLAWVAAEVVDFSAKQVQLVTAPGKKVFASPEKLFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPFGELSPHVFAVADTSYRAMMDEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAADDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAEKYKLQHPSHFHYLNQSKTYELDGVSSAEEYMKTRRAMDIVGISHEEQEAIFRILAAILHLGNIEFSAGKEHDSSVIKDEKSRFHMQMAADLFMCDVNLLLATLCTRSIQTREGSIVKALDCNAAVAGRDTLAKTVYARLFDWLVDKINRSVGQDLNSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIVALLDEACMFPKSTHKTFSTKLFQHFRSHHRLGKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLNSSKCPVVSGLFPLPPEESSRSSYKFSSVASRFKQQLQSLMETLNLTEPHYIRCVKPNSLNRPQKFENPSVIHQLRCGGVLEAVRISLAGYPTRRAYSEFVDRFGLLAPELMDGSYDEKTATEKILQKLKLENFQLGRTKVFLRAGQIGILDNRRAEVLDNAAKCIQHRLRTFIARRDFLSIQAAAFSLQAYCRGCLTRKMYAAKRQTAATISIQKYIRMWLLRHAYLKLISSAIIIQSNIRGFTTRQKFLHGKEHKAAALIQACWRMFKIRSAFRHRQASIVAIQCLWRCKQAKRELRRLKKEANEAGALRLAKSKLEKQLEDLTWRLHLEKRLRVSNEENRVAEISKLQKMIEALTLELDAAKLATINECNKNAVLQNQLELSVKEKYALERELVGMDELRKENFLLKSSLDGFEKKNAALELELENAQKESNETIEKLREVELKCSQLQQNVKSLEEKLLSLEDENHVLRQKALTVSPKSNRPGFAKSFSDKFSGAIGPTPRTERKPIFESPTPTKLIAPFTLALSDSRRSKLTAERHQDNYEFLSRCIKEDLGFKNGKPLAACIIYKCLLHWHAFESERTAIFDYIIEGINDILKVRDDDIILPYWLSNTSALLCLLQRNLRSNGFLATTAQRYTGSSGLTSRIGHGLKSPLKYIGYDDGISQVEARYPAILFKQQLTACVEKIFGLMRDNLKKELSPLLGLCIQAPKTGRVHGGKSSRSPGGLPQQPPSGQWDNIIKFLDSLMSRLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHQLNFIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEAISEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDPDDIDLPAFLSEYPCAQFLGPHQK 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00501 1518 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Bva10g00501 1518 Coils Coil 986 1048 - -
Bva10g00501 1518 SMART DIL_2 1336 1443 IPR002710 -
Bva10g00501 1518 MobiDBLite consensus disorder prediction 1286 1308 - -
Bva10g00501 1518 Gene3D Kinesin motor domain 62 659 IPR036961 -
Bva10g00501 1518 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Bva10g00501 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 779 878 IPR027417 -
Bva10g00501 1518 SMART iq_5 802 824 IPR000048 GO:0005515
Bva10g00501 1518 SMART iq_5 754 776 IPR000048 GO:0005515
Bva10g00501 1518 SMART iq_5 850 872 IPR000048 GO:0005515
Bva10g00501 1518 SMART iq_5 731 753 IPR000048 GO:0005515
Bva10g00501 1518 SMART iq_5 779 801 IPR000048 GO:0005515
Bva10g00501 1518 SMART iq_5 827 849 IPR000048 GO:0005515
Bva10g00501 1518 Coils Coil 864 894 - -
Bva10g00501 1518 Coils Coil 920 940 - -
Bva10g00501 1518 Gene3D - 782 828 - -
Bva10g00501 1518 Gene3D - 829 879 - -
Bva10g00501 1518 Gene3D - 731 781 - -
Bva10g00501 1518 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Bva10g00501 1518 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 CDD MyosinXI_CBD 1112 1484 IPR037975 GO:0007015
Bva10g00501 1518 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 CDD MYSc_Myo11 73 717 IPR036018 -
Bva10g00501 1518 ProSiteProfiles Dilute domain profile. 1161 1461 IPR002710 -
Bva10g00501 1518 PANTHER PROTEIN OPAQUE1-LIKE 3 1515 - -
Bva10g00501 1518 Gene3D - 249 306 - -
Bva10g00501 1518 PANTHER MYOSIN 3 1515 - -
Bva10g00501 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 779 IPR027417 -
Bva10g00501 1518 Pfam IQ calmodulin-binding motif 829 849 IPR000048 GO:0005515
Bva10g00501 1518 Pfam IQ calmodulin-binding motif 805 823 IPR000048 GO:0005515
Bva10g00501 1518 Pfam IQ calmodulin-binding motif 757 773 IPR000048 GO:0005515
Bva10g00501 1518 Pfam IQ calmodulin-binding motif 782 800 IPR000048 GO:0005515
Bva10g00501 1518 Gene3D - 664 730 - -
Bva10g00501 1518 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Bva10g00501 1518 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva10g00501 1518 ProSiteProfiles IQ motif profile. 780 806 IPR000048 GO:0005515
Bva10g00501 1518 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Bva10g00501 1518 Pfam DIL domain 1337 1440 IPR002710 -
Bva10g00501 1518 Gene3D - 435 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00501 Bva-Chr10 4851640 4867894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00501 1 1513 Myosins gene family AT4G33200 75.149 0.0 2336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00501 K10357 - gmx:100790815 2581.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00501 10 4851640 4867894 Bva10g00501 10 4851640 4867894 ECH