Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00494 ATGACTCCGAAGAAGATTACATGGAAGTCAATCATCTTGGTCTTAAGTTGTTACAAGATTAAATGCCCCCTGCGGGAAGCAGAGAAAGAGGTTTTAAAACGACGTTCTTTCCAGAGACTGTGCCTCTCAGATATAAGCAATTCGAGCTCCATTCAGGCTATTGATGATATTTCAGTTTCCCTCGTGGGCCCAAAACTTCATACATTCACCTTAGAGGAGCTTAGAGAAGCAACACAAAACTTCTCATGGAGTAATCTGCTAGGTGAAGGCGGGTTTGGACCTGTGTACAAGGGATTTGTTGATGACAAACTTAAGCCTGCTTTGAAGGCTCAGTCTGTAGCTGTGAAATGTCTTGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAGATTATCTTTCTCGGACAGCTAAGGCATCCTCATCTTGTCAAGTTAATTGGCTACTGTTACGAGGAGGAGCATAGGCTGTTGGTTTATGAATACATGGAAAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGATACTCTGCTGCCTTGCCATGGTCAACAAGGATGAAAATTGCATTGGGTGCGGGCAAGGGCTTAGCCTTCCTTCATGAAACAGATAAACCTGTAATATACAGGGATTTCAAAACATCAAATATCTTGCTAGACTCGGATTATACAGCAAAACTTTCAGATTTTGGGCTAGCTAAAGATGGCCCTGAAGGGGAAGATACTCATATATCGACGCGCGTAATGGGTACACAGGGCTATGCTGCTCCTGAGTATATCATGACAGGTCACCTCACAACCAAGAGTGATGTGTATAGCTATGGAGTTGTTCTGTTGGAATTGCTAACAGGAAAACGGGTAGTGGATAAGAGCCGACCAAGTCGAGAGCAAAACCTGGTGGAATGGGGAAGGCCTTTGTTGAAGGATCACAGAAAGCTTTTCCGTGTTATAGACCCCAGATTGGAAGGCCAATTTCCTATGAAAGGAGCTCACAAGGCTGCTAAACTGGCTTACAAATGCTTGAGTCACAACCCAAATTCAAGGCCCACAATGAGTGATGTGGTCAAGATATTGGACTCACTTCAGAACTTTGACGATGTATTCGTAGGACCTTTTGTGTATGTAGCCGTTAGTGAAACTAGCGACTG 1148 0.4443 MTPKKITWKSIILVLSCYKIKCPLREAEKEVLKRRSFQRLCLSDISNSSSIQAIDDISVSLVGPKLHTFTLEELREATQNFSWSNLLGEGGFGPVYKGFVDDKLKPALKAQSVAVKCLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEEEHRLLVYEYMERGSLENQLFRRYSAALPWSTRMKIALGAGKGLAFLHETDKPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGEDTHISTRVMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGKRVVDKSRPSREQNLVEWGRPLLKDHRKLFRVIDPRLEGQFPMKGAHKAAKLAYKCLSHNPNSRPTMSDVVKILDSLQNFDDVFVGPFVYVAVSETSD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00494 382 PANTHER KINASE 1B 21 381 - -
Bva10g00494 382 Gene3D Transferase(Phosphotransferase) domain 1 164 368 - -
Bva10g00494 382 Gene3D Phosphorylase Kinase; domain 1 43 163 - -
Bva10g00494 382 ProSiteProfiles Protein kinase domain profile. 81 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00494 382 Pfam Protein kinase domain 85 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g00494 382 SUPERFAMILY Protein kinase-like (PK-like) 57 358 IPR011009 -
Bva10g00494 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Bva10g00494 382 CDD STKc_IRAK 87 361 - -
Bva10g00494 382 PANTHER OS01G0588500 PROTEIN-RELATED 21 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00494 Bva-Chr10 4825033 4827380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00494 67 358 Glycoside Hydrolase AT3G07070 54.237 5.61e-106 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva10g00494 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00494 - - gmx:100802636 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00494 10 4825033 4827380 Bva10g00494 10 4825033 4827380 ECH
Bva10g00494 10 4825033 4827380 Bva06g02289 06 14862191 14866187 ECH
Bva06g00519 06 5715699 5717929 Bva10g00494 10 4825033 4827380 ECH
Bva08g02077 08 13786419 13788436 Bva10g00494 10 4825033 4827380 ECH
Bva02g02216 02 22307079 22309424 Bva10g00494 10 4825033 4827380 ECH